RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 VPS29Q9UBQ0 182 aa17.74■□□□□ 0.43
SMARCB1-204ENST00000407422 FETUBQ9UGM5 382 aa17.74■□□□□ 0.43
SMARCB1-204ENST00000407422 CNOT11Q9UKZ1 510 aaKnown RBP17.74■□□□□ 0.43
SMARCB1-204ENST00000407422 A0A1B0GVC2 190 aa17.73■□□□□ 0.43
SMARCB1-204ENST00000407422 A0A1W2PPM1 405 aa17.73■□□□□ 0.43
SMARCB1-204ENST00000407422 C1orf226A1L170 272 aa17.73■□□□□ 0.43
SMARCB1-204ENST00000407422 LRRC3CA6NJW4 275 aa17.73■□□□□ 0.43
SMARCB1-204ENST00000407422 ERAL1O75616 437 aaKnown RBP17.73■□□□□ 0.43
SMARCB1-204ENST00000407422 FBXW4P57775 412 aa17.73■□□□□ 0.43
SMARCB1-204ENST00000407422 DUSP2Q05923 314 aa17.73■□□□□ 0.43
SMARCB1-204ENST00000407422 MGAT2Q10469 447 aa17.73■□□□□ 0.43
SMARCB1-204ENST00000407422 SLC10A1Q14973 349 aa17.73■□□□□ 0.43
SMARCB1-204ENST00000407422 FAM111BQ6SJ93 734 aa17.73■□□□□ 0.43
SMARCB1-204ENST00000407422 SIMC1Q8NDZ2 872 aa17.73■□□□□ 0.43
SMARCB1-204ENST00000407422 METTL6Q8TCB7 284 aa17.73■□□□□ 0.43
SMARCB1-204ENST00000407422 ACMSDQ8TDX5 336 aa17.73■□□□□ 0.43
SMARCB1-204ENST00000407422 CHTF18Q8WVB6 975 aa17.73■□□□□ 0.43
SMARCB1-204ENST00000407422 TP53INP1Q96A56 240 aa17.73■□□□□ 0.43
SMARCB1-204ENST00000407422 ZNF703Q9H7S9 590 aaPredicted RBP17.73■□□□□ 0.43
SMARCB1-204ENST00000407422 ZFP64Q9NPA5 681 aa17.73■□□□□ 0.43
SMARCB1-204ENST00000407422 CNIH4Q9P003 139 aa17.73■□□□□ 0.43
SMARCB1-204ENST00000407422 EMCNQ9ULC0 261 aa17.73■□□□□ 0.43
SMARCB1-204ENST00000407422 DTX4Q9Y2E6 619 aa17.73■□□□□ 0.43
SMARCB1-204ENST00000407422 AKAP9Q99996 3911 aa17.73■□□□□ 0.43
SMARCB1-204ENST00000407422 OR14I1A6ND48 311 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 GUCY1B2O75343 617 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 KRT6AP02538 564 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 KRT6BP04259 564 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 ENDOUP21128 410 aaKnown RBP17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 PTGER4P35408 488 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 SOX18P35713 384 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 KRT6CP48668 564 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 HTR6P50406 440 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 PMPCAQ10713 525 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 PRICKLE4Q2TBC4 344 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 HLA-DQA1Q5Y7H0 255 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 BICRALQ6AI39 1079 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 TMEM211Q6ICI0 200 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 ZNF585AQ6P3V2 769 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 PRR22Q8IZ63 422 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 ZNF295-AS1Q8N0V1 137 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 ADCY4Q8NFM4 1077 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 JSRP1Q96MG2 331 aaPredicted RBP17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 KCNA7Q96RP8 456 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 ACPTQ9BZG2 426 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 TRIM8Q9BZR9 551 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 LDAHQ9H6V9 325 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 NMRK1Q9NWW6 199 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 BOKQ9UMX3 212 aaPredicted RBP17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 RNF6Q9Y252 685 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 NPFFR2Q9Y5X5 522 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 AQP7O14520 342 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 SUSD5O60279 629 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 SHBGP04278 402 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 ALDH9A1P49189 494 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 MAN2A2P49641 1150 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 NUP107P57740 925 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 DUSP8Q13202 625 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 EXOSC7Q15024 291 aaKnown RBP17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 CCDC71Q8IV32 467 aaPredicted RBP17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 SLC22A9Q8IVM8 553 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 VWA5B2Q8N398 1253 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 OR7G1Q8NGA0 311 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 RND1Q92730 232 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 DIO2Q92813 273 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 KLHL29Q96CT2 875 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 L3HYPDHQ96EM0 354 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 DOHHQ9BU89 302 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 BRINP2Q9C0B6 783 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 MAT2BQ9NZL9 334 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 SPRR3Q9UBC9 169 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 HEY2Q9UBP5 337 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 TIMM22Q9Y584 194 aa17.72■□□□□ 0.43
SMARCB1-204ENST00000407422 GOLGA6L10A6NI86 522 aa17.71■□□□□ 0.43
SMARCB1-204ENST00000407422 BCKDKO14874 412 aa17.71■□□□□ 0.43
SMARCB1-204ENST00000407422 ULK1O75385 1050 aa17.71■□□□□ 0.43
SMARCB1-204ENST00000407422 ATP1B1P05026 303 aa17.71■□□□□ 0.43
SMARCB1-204ENST00000407422 GSTA1P08263 222 aa17.71■□□□□ 0.43
SMARCB1-204ENST00000407422 HSD3B1P14060 373 aa17.71■□□□□ 0.43
SMARCB1-204ENST00000407422 GPX3P22352 226 aa17.71■□□□□ 0.43
SMARCB1-204ENST00000407422 HSD3B2P26439 372 aa17.71■□□□□ 0.43
SMARCB1-204ENST00000407422 ACVR2AP27037 513 aa17.71■□□□□ 0.43
SMARCB1-204ENST00000407422 HMOX2P30519 316 aa17.71■□□□□ 0.43
SMARCB1-204ENST00000407422 RAE1P78406 368 aaKnown RBP17.71■□□□□ 0.43
SMARCB1-204ENST00000407422 HMGCS1Q01581 520 aa17.71■□□□□ 0.43
SMARCB1-204ENST00000407422 MAP4K2Q12851 820 aa17.71■□□□□ 0.43
SMARCB1-204ENST00000407422 CSTF3Q12996 717 aaKnown RBP17.71■□□□□ 0.43
SMARCB1-204ENST00000407422 LCP2Q13094 533 aa17.71■□□□□ 0.43
SMARCB1-204ENST00000407422 RPS6KA2Q15349 733 aa17.71■□□□□ 0.43
SMARCB1-204ENST00000407422 LTB4RQ15722 352 aa17.71■□□□□ 0.43
SMARCB1-204ENST00000407422 NNATQ16517 81 aa17.71■□□□□ 0.43
SMARCB1-204ENST00000407422 C6orf163Q5TEZ5 329 aa17.71■□□□□ 0.43
SMARCB1-204ENST00000407422 GDF7Q7Z4P5 450 aa17.71■□□□□ 0.43
SMARCB1-204ENST00000407422 LRRC25Q8N386 305 aaPredicted RBP17.71■□□□□ 0.43
SMARCB1-204ENST00000407422 TRIM44Q96DX7 344 aaPredicted RBP17.71■□□□□ 0.43
SMARCB1-204ENST00000407422 CNRIP1Q96F85 164 aaPredicted RBP17.71■□□□□ 0.43
SMARCB1-204ENST00000407422 ZNF681Q96N22 645 aa17.71■□□□□ 0.43
SMARCB1-204ENST00000407422 UCK2Q9BZX2 261 aa17.71■□□□□ 0.43
SMARCB1-204ENST00000407422 NXF5Q9H1B4 397 aaKnown RBP17.71■□□□□ 0.43
SMARCB1-204ENST00000407422 GSTO2Q9H4Y5 243 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms