RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 C10orf111Q8N326 155 aa19.13■□□□□ 0.65
CHKB-201ENST00000406938 OR2L13Q8N349 312 aa19.13■□□□□ 0.65
CHKB-201ENST00000406938 ENDOVQ8N8Q3 282 aaKnown RBP19.13■□□□□ 0.65
CHKB-201ENST00000406938 C7orf57Q8NEG2 295 aa19.13■□□□□ 0.65
CHKB-201ENST00000406938 NLGN4YQ8NFZ3 816 aaPredicted RBP19.13■□□□□ 0.65
CHKB-201ENST00000406938 OR56A1Q8NGH5 318 aa19.13■□□□□ 0.65
CHKB-201ENST00000406938 MOAP1Q96BY2 351 aa19.13■□□□□ 0.65
CHKB-201ENST00000406938 CTHRC1Q96CG8 243 aa19.13■□□□□ 0.65
CHKB-201ENST00000406938 MMADHCQ9H3L0 296 aaPredicted RBP19.13■□□□□ 0.65
CHKB-201ENST00000406938 KAT8Q9H7Z6 458 aaKnown RBP19.13■□□□□ 0.65
CHKB-201ENST00000406938 C3orf14Q9HBI5 128 aa19.13■□□□□ 0.65
CHKB-201ENST00000406938 ASCL3Q9NQ33 180 aa19.13■□□□□ 0.65
CHKB-201ENST00000406938 PTGFRNQ9P2B2 879 aa19.13■□□□□ 0.65
CHKB-201ENST00000406938 SYNDIG1LA6NDD5 238 aa19.12■□□□□ 0.65
CHKB-201ENST00000406938 EMC8O43402 210 aa19.12■□□□□ 0.65
CHKB-201ENST00000406938 ALOX12BO75342 701 aa19.12■□□□□ 0.65
CHKB-201ENST00000406938 KLF7O75840 302 aaPredicted RBP19.12■□□□□ 0.65
CHKB-201ENST00000406938 SORBS2O94875 1100 aaKnown RBP19.12■□□□□ 0.65
CHKB-201ENST00000406938 KRT75O95678 551 aa19.12■□□□□ 0.65
CHKB-201ENST00000406938 GALNSP34059 522 aa19.12■□□□□ 0.65
CHKB-201ENST00000406938 MVDP53602 400 aa19.12■□□□□ 0.65
CHKB-201ENST00000406938 PRKAG1P54619 331 aa19.12■□□□□ 0.65
CHKB-201ENST00000406938 CASP9P55211 416 aa19.12■□□□□ 0.65
CHKB-201ENST00000406938 CAMK2BQ13554 666 aa19.12■□□□□ 0.65
CHKB-201ENST00000406938 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.12■□□□□ 0.651e-6■■■■□ 19.8
CHKB-201ENST00000406938 FHL5Q5TD97 284 aa19.12■□□□□ 0.65
CHKB-201ENST00000406938 C6orf163Q5TEZ5 329 aa19.12■□□□□ 0.65
CHKB-201ENST00000406938 IGF2-ASQ6U949 168 aa19.12■□□□□ 0.65
CHKB-201ENST00000406938 C6orf120Q7Z4R8 191 aa19.12■□□□□ 0.65
CHKB-201ENST00000406938 RNF130Q86XS8 419 aa19.12■□□□□ 0.65
CHKB-201ENST00000406938 SIMC1Q8NDZ2 872 aa19.12■□□□□ 0.65
CHKB-201ENST00000406938 OR10A6Q8NH74 314 aa19.12■□□□□ 0.65
CHKB-201ENST00000406938 ECSITQ9BQ95 431 aa19.12■□□□□ 0.65
CHKB-201ENST00000406938 ALG2Q9H553 416 aa19.12■□□□□ 0.65
CHKB-201ENST00000406938 ADAP2Q9NPF8 381 aa19.12■□□□□ 0.65
CHKB-201ENST00000406938 GPATCH2Q9NW75 528 aa19.12■□□□□ 0.65
CHKB-201ENST00000406938 GMPR2Q9P2T1 348 aaKnown RBP19.12■□□□□ 0.65
CHKB-201ENST00000406938 CORO2BQ9UQ03 480 aa19.12■□□□□ 0.65
CHKB-201ENST00000406938 PTRH2Q9Y3E5 179 aaKnown RBP19.12■□□□□ 0.65
CHKB-201ENST00000406938 NUP214P35658 2090 aaPredicted RBP19.12■□□□□ 0.65
CHKB-201ENST00000406938 A0A087WV62 115 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 C17orf105B2RV13 164 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 PLOD3O60568 738 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 RAD1O60671 282 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 CYC1P08574 325 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 IFI6P09912 130 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 NQO1P15559 274 aaKnown RBP19.11■□□□□ 0.65
CHKB-201ENST00000406938 GPX2P18283 190 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 TNNI3P19429 210 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 TCN2P20062 427 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 STAT5AP42229 794 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 PGDP52209 483 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 RPS26P62854 115 aaKnown RBP19.11■□□□□ 0.65
CHKB-201ENST00000406938 LIPEQ05469 1076 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 VAC14Q08AM6 782 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 MAP4K2Q12851 820 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 RGNQ15493 299 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 ELAVL1Q15717 326 aaKnown RBP19.11■□□□□ 0.65
CHKB-201ENST00000406938 COX20Q5RI15 118 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 PGM2L1Q6PCE3 622 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 BHLHB9Q6PI77 547 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 HPS6Q86YV9 775 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 FBXW8Q8N3Y1 598 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 FAM156AQ8NDB6 213 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 NUP43Q8NFH3 380 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 OR52N2Q8NGI0 321 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 OR2Y1Q8NGV0 311 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 PTPMT1Q8WUK0 201 aaPredicted RBP19.11■□□□□ 0.65
CHKB-201ENST00000406938 METTL21AQ8WXB1 218 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 CCDC124Q96CT7 223 aaKnown RBP19.11■□□□□ 0.65
CHKB-201ENST00000406938 MESP1Q9BRJ9 268 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 NRSN2Q9GZP1 204 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 NTMQ9P121 344 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 CD300AQ9UGN4 299 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 CFAP73A6NFT4 308 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 A8MUA0 341 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 HRKO00198 91 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 UMODP07911 640 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 TCN1P20061 433 aaPredicted RBP19.11■□□□□ 0.65
CHKB-201ENST00000406938 CD82P27701 267 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 GSK3BP49841 420 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 EEFSECP57772 596 aaKnown RBP19.11■□□□□ 0.65
CHKB-201ENST00000406938 ZNF267Q14586 743 aaPredicted RBP19.11■□□□□ 0.65
CHKB-201ENST00000406938 EXOSC7Q15024 291 aaKnown RBP19.11■□□□□ 0.65
CHKB-201ENST00000406938 ANKRD37Q7Z713 158 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 SLC35G5Q96KT7 338 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 MS4A4EQ96PG1 132 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 RAB3IPQ96QF0 476 aaPredicted RBP19.11■□□□□ 0.65
CHKB-201ENST00000406938 CNPPD1Q9BV87 410 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 PIF1Q9H611 641 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 EQTNQ9NQ60 294 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 C19orf53Q9UNZ5 99 aaPredicted RBP19.11■□□□□ 0.65
CHKB-201ENST00000406938 USP22Q9UPT9 525 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 PADI2Q9Y2J8 665 aa19.11■□□□□ 0.65
CHKB-201ENST00000406938 DCHS1Q96JQ0 3298 aa19.1■□□□□ 0.65
CHKB-201ENST00000406938 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.1■□□□□ 0.65
CHKB-201ENST00000406938 DXOO77932 396 aaKnown RBP19.1■□□□□ 0.65
CHKB-201ENST00000406938 CBX7O95931 251 aa19.1■□□□□ 0.65
CHKB-201ENST00000406938 HMGN2P05204 90 aaKnown RBP19.1■□□□□ 0.65
CHKB-201ENST00000406938 CD63P08962 238 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms