RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 RAD9AQ99638 391 aa13.35□□□□□ -0.27
DUSP28-202ENST00000405954 RTP3Q9BQQ7 232 aa13.35□□□□□ -0.27
DUSP28-202ENST00000405954 SPATA5L1Q9BVQ7 753 aa13.35□□□□□ -0.27
DUSP28-202ENST00000405954 DERL2Q9GZP9 239 aa13.35□□□□□ -0.27
DUSP28-202ENST00000405954 PURGQ9UJV8 347 aaKnown RBP13.35□□□□□ -0.27
DUSP28-202ENST00000405954 FBXW11Q9UKB1 542 aa13.35□□□□□ -0.27
DUSP28-202ENST00000405954 MGAT4DA6NG13 374 aa13.35□□□□□ -0.27
DUSP28-202ENST00000405954 LCMT2O60294 686 aaKnown RBP13.35□□□□□ -0.27
DUSP28-202ENST00000405954 PKMP14618 531 aaKnown RBP13.35□□□□□ -0.27
DUSP28-202ENST00000405954 FOSL2P15408 326 aa13.35□□□□□ -0.27
DUSP28-202ENST00000405954 ELK1P19419 428 aa13.35□□□□□ -0.27
DUSP28-202ENST00000405954 PRKAR1BP31321 381 aa13.35□□□□□ -0.27
DUSP28-202ENST00000405954 STAT5AP42229 794 aa13.35□□□□□ -0.27
DUSP28-202ENST00000405954 C18orf63Q68DL7 685 aa13.35□□□□□ -0.27
DUSP28-202ENST00000405954 MSRB3Q8IXL7 192 aa13.35□□□□□ -0.27
DUSP28-202ENST00000405954 DBF4BQ8NFT6 615 aa13.35□□□□□ -0.27
DUSP28-202ENST00000405954 TMEM163Q8TC26 289 aa13.35□□□□□ -0.27
DUSP28-202ENST00000405954 EPYCQ99645 322 aa13.35□□□□□ -0.27
DUSP28-202ENST00000405954 DOHHQ9BU89 302 aa13.35□□□□□ -0.27
DUSP28-202ENST00000405954 ZNF471Q9BX82 626 aaPredicted RBP13.35□□□□□ -0.27
DUSP28-202ENST00000405954 HEXA-AS1Q9H8Q6 139 aa13.35□□□□□ -0.27
DUSP28-202ENST00000405954 TNFSF13BQ9Y275 285 aa13.35□□□□□ -0.27
DUSP28-202ENST00000405954 DERAQ9Y315 318 aa13.35□□□□□ -0.27
DUSP28-202ENST00000405954 TMEM200CA6NKL6 621 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 GATCO43716 136 aaKnown RBP13.34□□□□□ -0.27
DUSP28-202ENST00000405954 POP7O75817 140 aaKnown RBP13.34□□□□□ -0.27
DUSP28-202ENST00000405954 CELF2O95319 508 aaKnown RBP13.34□□□□□ -0.27
DUSP28-202ENST00000405954 RAB36O95755 333 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 IFNA4P05014 189 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 NPR2P20594 1047 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 SLC3A1Q07837 685 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 CLINT1Q14677 625 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 GPRC6AQ5T6X5 926 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 OVCH2Q7RTZ1 564 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 FAM124AQ86V42 546 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 CMIPQ8IY22 773 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 CLECL1Q8IZS7 167 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 PROKR2Q8NFJ6 384 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 PXT1Q8NFP0 134 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 FBXO17Q96EF6 278 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 AHCYL2Q96HN2 611 aaKnown RBP13.34□□□□□ -0.27
DUSP28-202ENST00000405954 LRR1Q96L50 414 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 RBM14Q96PK6 669 aaKnown RBP13.34□□□□□ -0.27
DUSP28-202ENST00000405954 IFT27Q9BW83 186 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 CTPS2Q9NRF8 586 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 BABAM2Q9NXR7 383 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 NRCAMQ92823 1304 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 B4GALT3O60512 393 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 PRAMEF2O60811 474 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 RPP40O75818 363 aaKnown RBP13.34□□□□□ -0.27
DUSP28-202ENST00000405954 PBX3P40426 434 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 ST3GAL2Q16842 350 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 SLC5A12Q1EHB4 618 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 GCNT6Q5T4J0 391 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 RANBP10Q6VN20 620 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 RBMS3Q6XE24 437 aaKnown RBP13.34□□□□□ -0.27
DUSP28-202ENST00000405954 GLT6D1Q7Z4J2 308 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 RNF180Q86T96 592 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 TMEM185BQ9H7F4 350 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 SLC6A20Q9NP91 592 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 ASF1BQ9NVP2 202 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 CHD5Q8TDI0 1954 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 SHROOM3Q8TF72 1996 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 IFNW1P05000 195 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 HBQ1P09105 142 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 SMPD1P17405 629 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 PAICSP22234 425 aaKnown RBP13.34□□□□□ -0.27
DUSP28-202ENST00000405954 HMGB2P26583 209 aaKnown RBP13.34□□□□□ -0.27
DUSP28-202ENST00000405954 AGFG1P52594 562 aaKnown RBP13.34□□□□□ -0.27
DUSP28-202ENST00000405954 LRRC37A5PQ49AS3 106 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 KIAA1161Q6NSJ0 714 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 SLC27A4Q6P1M0 643 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 FAHD1Q6P587 224 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 BEND4Q6ZU67 534 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 SIAH3Q8IW03 269 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 SAMD11Q96NU1 681 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 CYP2S1Q96SQ9 504 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 GAL3ST1Q99999 423 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 ZNF408Q9H9D4 720 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 NDUFB11Q9NX14 153 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 ZNF225Q9UK10 706 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 FLVCR2Q9UPI3 526 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 MAP4K5Q9Y4K4 846 aa13.34□□□□□ -0.27
DUSP28-202ENST00000405954 GABRR3A8MPY1 467 aa13.33□□□□□ -0.27
DUSP28-202ENST00000405954 LOC730098B7Z3J9 87 aa13.33□□□□□ -0.27
DUSP28-202ENST00000405954 DNASE2O00115 360 aaPredicted RBP13.33□□□□□ -0.27
DUSP28-202ENST00000405954 GABRDO14764 452 aa13.33□□□□□ -0.27
DUSP28-202ENST00000405954 ARPC1BO15143 372 aaKnown RBP13.33□□□□□ -0.27
DUSP28-202ENST00000405954 FMO6PO60774 539 aa13.33□□□□□ -0.27
DUSP28-202ENST00000405954 PRG2P13727 222 aa13.33□□□□□ -0.27
DUSP28-202ENST00000405954 INSRRP14616 1297 aa13.33□□□□□ -0.27
DUSP28-202ENST00000405954 FPR3P25089 353 aa13.33□□□□□ -0.27
DUSP28-202ENST00000405954 KCNJ5P48544 419 aa13.33□□□□□ -0.27
DUSP28-202ENST00000405954 VEGFCP49767 419 aa13.33□□□□□ -0.27
DUSP28-202ENST00000405954 SIRPB2Q5JXA9 342 aa13.33□□□□□ -0.27
DUSP28-202ENST00000405954 CDC73Q6P1J9 531 aa13.33□□□□□ -0.27
DUSP28-202ENST00000405954 SERPINA12Q8IW75 414 aa13.33□□□□□ -0.27
DUSP28-202ENST00000405954 GPR135Q8IZ08 494 aa13.33□□□□□ -0.27
DUSP28-202ENST00000405954 TRMT10AQ8TBZ6 339 aaKnown RBP13.33□□□□□ -0.27
DUSP28-202ENST00000405954 NXPE3Q969Y0 559 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms