RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 VWA5B2Q8N398 1253 aa13.52□□□□□ -0.25
CDPF1-203ENST00000404583 TMEM156Q8N614 296 aa13.52□□□□□ -0.25
CDPF1-203ENST00000404583 ZNF615Q8N8J6 731 aa13.52□□□□□ -0.25
CDPF1-203ENST00000404583 SIMC1Q8NDZ2 872 aa13.52□□□□□ -0.25
CDPF1-203ENST00000404583 OR9A2Q8NGT5 310 aa13.52□□□□□ -0.25
CDPF1-203ENST00000404583 KAT2AQ92830 837 aa13.52□□□□□ -0.25
CDPF1-203ENST00000404583 MEAF6Q9HAF1 191 aa13.52□□□□□ -0.25
CDPF1-203ENST00000404583 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.52□□□□□ -0.25
CDPF1-203ENST00000404583 SH3BP4Q9P0V3 963 aa13.52□□□□□ -0.25
CDPF1-203ENST00000404583 LRFN1Q9P244 771 aa13.52□□□□□ -0.25
CDPF1-203ENST00000404583 ZNF639Q9UID6 485 aa13.52□□□□□ -0.25
CDPF1-203ENST00000404583 EIF3LQ9Y262 564 aaKnown RBP13.52□□□□□ -0.25
CDPF1-203ENST00000404583 NUP214P35658 2090 aaPredicted RBP13.51□□□□□ -0.25
CDPF1-203ENST00000404583 SDHDO14521 159 aa13.51□□□□□ -0.25
CDPF1-203ENST00000404583 HDAC3O15379 428 aa13.51□□□□□ -0.25
CDPF1-203ENST00000404583 ATP8B1O43520 1251 aa13.51□□□□□ -0.25
CDPF1-203ENST00000404583 ZNF354AO60765 605 aaPredicted RBP13.51□□□□□ -0.25
CDPF1-203ENST00000404583 G6PDP11413 515 aa13.51□□□□□ -0.25
CDPF1-203ENST00000404583 PRPS2P11908 318 aa13.51□□□□□ -0.25
CDPF1-203ENST00000404583 PCSK2P16519 638 aa13.51□□□□□ -0.25
CDPF1-203ENST00000404583 MPIP34949 423 aa13.51□□□□□ -0.25
CDPF1-203ENST00000404583 TRHRP34981 398 aaPredicted RBP13.51□□□□□ -0.25
CDPF1-203ENST00000404583 CYB561P49447 251 aa13.51□□□□□ -0.25
CDPF1-203ENST00000404583 HLCSP50747 726 aa13.51□□□□□ -0.25
CDPF1-203ENST00000404583 SSR4P51571 173 aa13.51□□□□□ -0.25
CDPF1-203ENST00000404583 NCBP2P52298 156 aaKnown RBP eCLIP13.51□□□□□ -0.25
CDPF1-203ENST00000404583 TLE1Q04724 770 aa13.51□□□□□ -0.25
CDPF1-203ENST00000404583 MAD2L1Q13257 205 aaPredicted RBP13.51□□□□□ -0.25
CDPF1-203ENST00000404583 EBPQ15125 230 aaKnown RBP13.51□□□□□ -0.25
CDPF1-203ENST00000404583 PRR30Q53SZ7 412 aaPredicted RBP13.51□□□□□ -0.25
CDPF1-203ENST00000404583 ZNF385BQ569K4 471 aa13.51□□□□□ -0.25
CDPF1-203ENST00000404583 ZNF628Q5EBL2 1059 aa13.51□□□□□ -0.25
CDPF1-203ENST00000404583 CISD2Q8N5K1 135 aaKnown RBP13.51□□□□□ -0.25
CDPF1-203ENST00000404583 MDS2Q8NDY4 140 aa13.51□□□□□ -0.25
CDPF1-203ENST00000404583 OR7G1Q8NGA0 311 aa13.51□□□□□ -0.25
CDPF1-203ENST00000404583 NUBPLQ8TB37 319 aa13.51□□□□□ -0.25
CDPF1-203ENST00000404583 PIWIL2Q8TC59 973 aaKnown RBP13.51□□□□□ -0.25
CDPF1-203ENST00000404583 NUDT8Q8WV74 236 aa13.51□□□□□ -0.25
CDPF1-203ENST00000404583 CTHRC1Q96CG8 243 aa13.51□□□□□ -0.25
CDPF1-203ENST00000404583 GAL3ST4Q96RP7 486 aa13.51□□□□□ -0.25
CDPF1-203ENST00000404583 RASL10BQ96S79 203 aa13.51□□□□□ -0.25
CDPF1-203ENST00000404583 HES7Q9BYE0 225 aa13.51□□□□□ -0.25
CDPF1-203ENST00000404583 WWTR1Q9GZV5 400 aa13.51□□□□□ -0.25
CDPF1-203ENST00000404583 GLIPR2Q9H4G4 154 aa13.51□□□□□ -0.25
CDPF1-203ENST00000404583 ANKRA2Q9H9E1 313 aa13.51□□□□□ -0.25
CDPF1-203ENST00000404583 SLCO1B3Q9NPD5 702 aa13.51□□□□□ -0.25
CDPF1-203ENST00000404583 BCAP29Q9UHQ4 241 aa13.51□□□□□ -0.25
CDPF1-203ENST00000404583 PCDHGA10Q9Y5H3 936 aa13.51□□□□□ -0.25
CDPF1-203ENST00000404583 GOLGA8QA0A0J9YX86 632 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 GOLGA8OA6NCC3 632 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 OR6C76A6NM76 312 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 GOLGA8NF8WBI6 632 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 SLCO1B7G3V0H7 640 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 PRAMEF2O60811 474 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 VPS4BO75351 444 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 NEURL1O76050 574 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 CBX7O95931 251 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 NTSP30990 170 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 DIO3P55073 304 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 DUSP8Q13202 625 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 PDE7AQ13946 482 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 MPEG1Q2M385 716 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 SMU1Q2TAY7 513 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 PIGGQ5H8A4 983 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 ZNF766Q5HY98 468 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 IL20RBQ6UXL0 311 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 LARP4Q71RC2 724 aaKnown RBP eCLIP13.5□□□□□ -0.25
CDPF1-203ENST00000404583 ZNF227Q86WZ6 799 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 FAM9CQ8IZT9 166 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 OR7A2PQ8NGA2 310 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 OR52R1Q8NGF1 315 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 C16orf52Q8NHV5 167 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 CPT1CQ8TCG5 803 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 ZNF675Q8TD23 568 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 CKAP2Q8WWK9 683 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 ASB15Q8WXK1 588 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 CIDECQ96AQ7 238 aaPredicted RBP13.5□□□□□ -0.25
CDPF1-203ENST00000404583 PPCDCQ96CD2 204 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 SNRNP40Q96DI7 357 aaKnown RBP13.5□□□□□ -0.25
CDPF1-203ENST00000404583 AMDHD1Q96NU7 426 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 WDR55Q9H6Y2 383 aaPredicted RBP13.5□□□□□ -0.25
CDPF1-203ENST00000404583 TRIM45Q9H8W5 580 aaPredicted RBP13.5□□□□□ -0.25
CDPF1-203ENST00000404583 KLHL1Q9NR64 748 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 NOP53Q9NZM5 478 aaKnown RBP13.5□□□□□ -0.25
CDPF1-203ENST00000404583 DTX4Q9Y2E6 619 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 NBASA2RRP1 2371 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 SHANK1Q9Y566 2161 aa13.5□□□□□ -0.25
CDPF1-203ENST00000404583 C2orf92A0A1B0GVN3 265 aa13.49□□□□□ -0.25
CDPF1-203ENST00000404583 TRPC5OSA6NMA1 111 aa13.49□□□□□ -0.25
CDPF1-203ENST00000404583 CDK2AP1O14519 115 aa13.49□□□□□ -0.25
CDPF1-203ENST00000404583 SCAMP2O15127 329 aaKnown RBP13.49□□□□□ -0.25
CDPF1-203ENST00000404583 TBX19O60806 448 aa13.49□□□□□ -0.25
CDPF1-203ENST00000404583 OR6B1O95007 311 aa13.49□□□□□ -0.25
CDPF1-203ENST00000404583 LBPP18428 481 aa13.49□□□□□ -0.25
CDPF1-203ENST00000404583 EPHA3P29320 983 aa13.49□□□□□ -0.25
CDPF1-203ENST00000404583 SOX3P41225 446 aa13.49□□□□□ -0.25
CDPF1-203ENST00000404583 INPP5JQ15735 1006 aaPredicted RBP13.49□□□□□ -0.25
CDPF1-203ENST00000404583 MAVSQ7Z434 540 aa13.49□□□□□ -0.25
CDPF1-203ENST00000404583 R3HCC1LQ7Z5L2 792 aaKnown RBP13.49□□□□□ -0.25
CDPF1-203ENST00000404583 KRTCAP2Q8N6L1 136 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms