RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 SLC37A1P57057 533 aa27.29■■□□□ 1.96
USP42-202ENST00000404008 PHC1P78364 1004 aa27.29■■□□□ 1.96
USP42-202ENST00000404008 MYBPC3Q14896 1274 aa27.29■■□□□ 1.96
USP42-202ENST00000404008 TRMT12Q53H54 448 aaKnown RBP27.29■■□□□ 1.96
USP42-202ENST00000404008 H3F3CQ6NXT2 135 aa27.29■■□□□ 1.96
USP42-202ENST00000404008 FDCSPQ8NFU4 85 aa27.29■■□□□ 1.96
USP42-202ENST00000404008 ERP27Q96DN0 273 aa27.29■■□□□ 1.96
USP42-202ENST00000404008 GPR83Q9NYM4 423 aa27.29■■□□□ 1.96
USP42-202ENST00000404008 SNX3O60493 162 aa27.28■■□□□ 1.96
USP42-202ENST00000404008 S100A3P33764 101 aa27.28■■□□□ 1.96
USP42-202ENST00000404008 DGKQP52824 942 aa27.28■■□□□ 1.96
USP42-202ENST00000404008 RHDQ02161 417 aa27.28■■□□□ 1.96
USP42-202ENST00000404008 RAPSNQ13702 412 aa27.28■■□□□ 1.96
USP42-202ENST00000404008 LINC00303Q3SY05 128 aa27.28■■□□□ 1.96
USP42-202ENST00000404008 IRAK1BP1Q5VVH5 260 aa27.28■■□□□ 1.96
USP42-202ENST00000404008 TMEM107Q6UX40 140 aa27.28■■□□□ 1.96
USP42-202ENST00000404008 HSDL2Q6YN16 418 aa27.28■■□□□ 1.96
USP42-202ENST00000404008 ZNF615Q8N8J6 731 aa27.28■■□□□ 1.96
USP42-202ENST00000404008 OR7G2Q8NG99 324 aa27.28■■□□□ 1.96
USP42-202ENST00000404008 OR7G1Q8NGA0 311 aa27.28■■□□□ 1.96
USP42-202ENST00000404008 TTC9Q92623 222 aa27.28■■□□□ 1.96
USP42-202ENST00000404008 RABEP2Q9H5N1 569 aa27.28■■□□□ 1.96
USP42-202ENST00000404008 SDAD1Q9NVU7 687 aaKnown RBP eCLIP27.28■■□□□ 1.96
USP42-202ENST00000404008 FAM234BA2RU67 622 aa27.27■■□□□ 1.96
USP42-202ENST00000404008 PLOD2O00469 737 aa27.27■■□□□ 1.96
USP42-202ENST00000404008 RNASET2O00584 256 aaKnown RBP27.27■■□□□ 1.96
USP42-202ENST00000404008 SCN2BO60939 215 aa27.27■■□□□ 1.96
USP42-202ENST00000404008 CBX7O95931 251 aa27.27■■□□□ 1.96
USP42-202ENST00000404008 PGRP06401 933 aa27.27■■□□□ 1.96
USP42-202ENST00000404008 IFI6P09912 130 aa27.27■■□□□ 1.96
USP42-202ENST00000404008 MC3RP41968 323 aa27.27■■□□□ 1.96
USP42-202ENST00000404008 POLR2JP52435 117 aaKnown RBP27.27■■□□□ 1.96
USP42-202ENST00000404008 FHL5Q5TD97 284 aa27.27■■□□□ 1.96
USP42-202ENST00000404008 ANXA8L1Q5VT79 327 aa27.27■■□□□ 1.96
USP42-202ENST00000404008 RNF111Q6ZNA4 994 aa27.27■■□□□ 1.96
USP42-202ENST00000404008 CPSF7Q8N684 471 aaKnown RBP27.27■■□□□ 1.96
USP42-202ENST00000404008 SIRT6Q8N6T7 355 aa27.27■■□□□ 1.96
USP42-202ENST00000404008 SIMC1Q8NDZ2 872 aa27.27■■□□□ 1.96
USP42-202ENST00000404008 OR5P2Q8WZ92 322 aa27.27■■□□□ 1.96
USP42-202ENST00000404008 ELP4Q96EB1 424 aa27.27■■□□□ 1.96
USP42-202ENST00000404008 DEFB126Q9BYW3 111 aa27.27■■□□□ 1.96
USP42-202ENST00000404008 OR10A5Q9H207 317 aa27.27■■□□□ 1.96
USP42-202ENST00000404008 TMEM45AQ9NWC5 275 aa27.27■■□□□ 1.96
USP42-202ENST00000404008 FAM120CQ9NX05 1096 aaKnown RBP27.27■■□□□ 1.96
USP42-202ENST00000404008 A0A087WV62 115 aa27.26■■□□□ 1.95
USP42-202ENST00000404008 PRKNO60260 465 aaPredicted RBP27.26■■□□□ 1.95
USP42-202ENST00000404008 PLOD3O60568 738 aa27.26■■□□□ 1.95
USP42-202ENST00000404008 IL6P05231 212 aa27.26■■□□□ 1.95
USP42-202ENST00000404008 GPC1P35052 558 aa27.26■■□□□ 1.95
USP42-202ENST00000404008 CDK9P50750 372 aaKnown RBP27.26■■□□□ 1.95
USP42-202ENST00000404008 DUSP8Q13202 625 aa27.26■■□□□ 1.95
USP42-202ENST00000404008 EXOSC7Q15024 291 aaKnown RBP27.26■■□□□ 1.95
USP42-202ENST00000404008 FUNDC1Q8IVP5 155 aa27.26■■□□□ 1.95
USP42-202ENST00000404008 C9orf40Q8IXQ3 194 aa27.26■■□□□ 1.95
USP42-202ENST00000404008 OR8K3Q8NH51 312 aa27.26■■□□□ 1.95
USP42-202ENST00000404008 ANKRA2Q9H9E1 313 aa27.26■■□□□ 1.95
USP42-202ENST00000404008 CCDC167Q9P0B6 97 aa27.26■■□□□ 1.95
USP42-202ENST00000404008 CACNA1GO43497 2377 aa27.25■■□□□ 1.95
USP42-202ENST00000404008 PRSS51A0A1B0GVH4 220 aa27.25■■□□□ 1.95
USP42-202ENST00000404008 OR6C76A6NM76 312 aa27.25■■□□□ 1.95
USP42-202ENST00000404008 A8MUI8 341 aa27.25■■□□□ 1.95
USP42-202ENST00000404008 ZFAND5O76080 213 aa27.25■■□□□ 1.95
USP42-202ENST00000404008 C6orf47O95873 294 aa27.25■■□□□ 1.95
USP42-202ENST00000404008 RNF4P78317 190 aa27.25■■□□□ 1.95
USP42-202ENST00000404008 RCAN2Q14206 197 aa27.25■■□□□ 1.95
USP42-202ENST00000404008 PIGWQ7Z7B1 504 aa27.25■■□□□ 1.95
USP42-202ENST00000404008 CLECL1Q8IZS7 167 aa27.25■■□□□ 1.95
USP42-202ENST00000404008 VPS37AQ8NEZ2 397 aa27.25■■□□□ 1.95
USP42-202ENST00000404008 PSMA8Q8TAA3 256 aa27.25■■□□□ 1.95
USP42-202ENST00000404008 ZNF552Q9H707 407 aaPredicted RBP27.25■■□□□ 1.95
USP42-202ENST00000404008 PTGFRNQ9P2B2 879 aa27.25■■□□□ 1.95
USP42-202ENST00000404008 PCDHGA9Q9Y5G4 932 aaKnown RBP27.25■■□□□ 1.95
USP42-202ENST00000404008 BOD1L1Q8NFC6 3051 aa27.24■■□□□ 1.95
USP42-202ENST00000404008 SOX11P35716 441 aa27.24■■□□□ 1.95
USP42-202ENST00000404008 AGKQ53H12 422 aa27.24■■□□□ 1.95
USP42-202ENST00000404008 CRB2Q5IJ48 1285 aa27.24■■□□□ 1.95
USP42-202ENST00000404008 AGAP7PQ5VUJ5 663 aa27.24■■□□□ 1.95
USP42-202ENST00000404008 BLOC1S3Q6QNY0 202 aa27.24■■□□□ 1.95
USP42-202ENST00000404008 ANKRD46Q86W74 232 aa27.24■■□□□ 1.95
USP42-202ENST00000404008 ARMC10Q8N2F6 343 aa27.24■■□□□ 1.95
USP42-202ENST00000404008 OR2L13Q8N349 312 aa27.24■■□□□ 1.95
USP42-202ENST00000404008 SLC5A8Q8N695 610 aa27.24■■□□□ 1.95
USP42-202ENST00000404008 OR52R1Q8NGF1 315 aa27.24■■□□□ 1.95
USP42-202ENST00000404008 AGAP4Q96P64 663 aa27.24■■□□□ 1.95
USP42-202ENST00000404008 OR52E6Q96RD3 313 aa27.24■■□□□ 1.95
USP42-202ENST00000404008 NPAS2Q99743 824 aa27.24■■□□□ 1.95
USP42-202ENST00000404008 ARHGAP9Q9BRR9 750 aa27.24■■□□□ 1.95
USP42-202ENST00000404008 SLC25A23Q9BV35 468 aa27.24■■□□□ 1.95
USP42-202ENST00000404008 NEUROD4Q9HD90 331 aa27.24■■□□□ 1.95
USP42-202ENST00000404008 SAR1AQ9NR31 198 aa27.24■■□□□ 1.95
USP42-202ENST00000404008 SIRT3Q9NTG7 399 aaPredicted RBP27.24■■□□□ 1.95
USP42-202ENST00000404008 MRGBPQ9NV56 204 aa27.24■■□□□ 1.95
USP42-202ENST00000404008 BCAP29Q9UHQ4 241 aa27.24■■□□□ 1.95
USP42-202ENST00000404008 MKRN2OSH3BPM6 223 aa27.23■■□□□ 1.95
USP42-202ENST00000404008 PRAMEF2O60811 474 aa27.23■■□□□ 1.95
USP42-202ENST00000404008 BCAS2O75934 225 aaPredicted RBP27.23■■□□□ 1.95
USP42-202ENST00000404008 HBA1P69905 142 aa27.23■■□□□ 1.95
USP42-202ENST00000404008 B3GNTL1Q67FW5 361 aaPredicted RBP27.23■■□□□ 1.95
USP42-202ENST00000404008 FCRLBQ6BAA4 426 aa27.23■■□□□ 1.95
USP42-202ENST00000404008 C16orf52Q8NHV5 167 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms