RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 LRRC61Q9BV99 259 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 STRADBQ9C0K7 418 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 MOB1AQ9H8S9 216 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 AURKCQ9UQB9 309 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 IGLV4-3A0A075B6K6 122 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 A0A0U1RQV5 110 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 NDUFAF8A1L188 74 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 EPM2AB3EWF7 344 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 CA3P07451 260 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 RALAP11233 206 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 FOSL2P15408 326 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 ARF4P18085 180 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 PAICSP22234 425 aaKnown RBP3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 IL4RP24394 825 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 DNAJB1P25685 340 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 UCP1P25874 307 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 CAPGP40121 348 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 SLC6A8P48029 635 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 SLC1A6P48664 564 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 SGSHP51688 502 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 HSD17B7P56937 341 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 SRPXP78539 464 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 NAAAQ02083 359 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 PDIA5Q14554 519 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 DDI2Q5TDH0 399 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 SEL1L2Q5TEA6 688 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 C1orf189Q5VU69 101 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 PNCKQ6P2M8 343 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 ZNF613Q6PF04 617 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 DPY19L2P2Q6ZN68 376 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 TIPARPQ7Z3E1 657 aaKnown RBP3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 GPR142Q7Z601 462 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 SYVN1Q86TM6 617 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 LUZP1Q86V48 1076 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 ERC1Q8IUD2 1116 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 ZNF491Q8N8L2 437 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 OR1B1Q8NGR6 318 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 SLC45A3Q96JT2 553 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 CHCHD5Q9BSY4 110 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 ATG10Q9H0Y0 220 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 DPH5Q9H2P9 285 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 ALG9Q9H6U8 611 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 Q9HAA7 133 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 ZDHHC18Q9NUE0 388 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 GDAP2Q9NXN4 497 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 THYN1Q9P016 225 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 RCOR3Q9P2K3 495 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 MGAT4AQ9UM21 535 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 RNF115Q9Y4L5 304 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 AFF2P51816 1311 aa3.17□□□□□ -1.9
HMGB1P17-201ENST00000403495 SHISA9B4DS77 424 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 H0YL77 283 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 LGALS8O00214 317 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 TRAFD1O14545 582 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 CFLARO15519 480 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 SDC3O75056 442 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 FRAT2O75474 233 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 APBB3O95704 486 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 SEMA4FO95754 770 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 GUCA1CO95843 209 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 APRTP07741 180 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 CYP2F1P24903 491 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 HMGCLP35914 325 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 MATKP42679 507 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 SLC1A4P43007 532 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 ASMTP46597 345 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 HAND2P61296 217 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 PRKCEQ02156 737 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 KLHL30Q0D2K2 578 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 SNX1Q13596 522 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 FASTKQ14296 549 aaKnown RBP3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 TMEM44Q2T9K0 475 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 ADPRMQ3LIE5 342 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 POM121L1PQ3SYA9 428 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 ZNF343Q6P1L6 599 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 CWC27Q6UX04 472 aaKnown RBP3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 GPRIN3Q6ZVF9 776 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 GPBP1Q86WP2 473 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 RNF130Q86XS8 419 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 LMNTD2Q8IXW0 634 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 CNPY4Q8N129 248 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 ARFGAP2Q8N6H7 521 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 SAMD12Q8N8I0 201 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 WDR36Q8NI36 951 aaKnown RBP3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 LRRC15Q8TF66 581 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 BIRC7Q96CA5 298 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 ZNF689Q96CS4 500 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 C14orf79Q96F83 325 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 C16orf45Q96MC5 204 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 NDUFAF3Q9BU61 184 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 KRTAP2-2Q9BYT5 123 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 OCR1Q9BZK8 76 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 GFRA4Q9GZZ7 299 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 RNF41Q9H4P4 317 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 P2RX2Q9UBL9 471 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 SLC9A8Q9Y2E8 581 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 AUP1Q9Y679 476 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 FKBP7Q9Y680 259 aa3.16□□□□□ -1.9
HMGB1P17-201ENST00000403495 STYXL1Q9Y6J8 313 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms