RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	CCDC177	Q9NQR7	707 aa	Predicted RBP	6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	EIF2B3	Q9NR50	452 aa	Known RBP	6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CHRAC1	Q9NRG0	131 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	TMEM184C	Q9NVA4	438 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	PAK5	Q9P286	719 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	DKK2	Q9UBU2	259 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	AMFR	Q9UKV5	643 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ZNF148	Q9UQR1	794 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	MTO1	Q9Y2Z2	717 aa	Known RBP	6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	NAALAD2	Q9Y3Q0	740 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	SLC22A7	Q9Y694	548 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	NF1	P21359	2839 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	AKAP9	Q99996	3911 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	PKDREJ	Q9NTG1	2253 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	BCKDK	O14874	412 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ZNHIT1	O43257	154 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	FRS3	O43559	492 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	AKAP8	O43823	692 aa	Known RBP	6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	KLK8	O60259	260 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	NIPSNAP2	O75323	286 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	AVIL	O75366	819 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	VAPB	O95292	243 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	STATH	P02808	62 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	TUBB4A	P04350	444 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	TNFRSF1A	P19438	455 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	TFEB	P19484	476 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	OGN	P20774	298 aa	Known RBP	6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	GNAL	P38405	381 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	RFC3	P40938	356 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	KCNJ5	P48544	419 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	NPY2R	P49146	381 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	RHAG	Q02094	409 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	RGS1	Q08116	209 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	PMPCA	Q10713	525 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CEBPE	Q15744	281 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	PHKG1	Q16816	387 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	SLC25A35	Q3KQZ1	300 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	TIGD2	Q4W5G0	525 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	SEL1L2	Q5TEA6	688 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	FNDC7	Q5VTL7	733 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	LRRC8E	Q6NSJ5	796 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	PPP4R4	Q6NUP7	873 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	AADACL2	Q6P093	401 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	C4orf22	Q6V702	233 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	RHOU	Q7L0Q8	258 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ABHD13	Q7L211	337 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	PRSS41	Q7RTY9	318 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	VN1R4	Q7Z5H5	301 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	C17orf64	Q86WR6	236 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CCDC71	Q8IV32	467 aa	Predicted RBP	6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	GPALPP1	Q8IXQ4	340 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CYP4Z2P	Q8N1L4	340 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	PLPP5	Q8NEB5	264 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ELP5	Q8TE02	316 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	LPGAT1	Q92604	370 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	TSLP	Q969D9	159 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	BIRC8	Q96P09	236 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	NPAS2	Q99743	824 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CCDC77	Q9BR77	488 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CNPPD1	Q9BV87	410 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	SARG	Q9BW04	601 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	TSGA10	Q9BZW7	698 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	TINAGL1	Q9GZM7	467 aa	Predicted RBP	6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	TRIM45	Q9H8W5	580 aa	Predicted RBP	6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CLK4	Q9HAZ1	481 aa	Known RBP	6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	TREX1	Q9NSU2	369 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	TFR2	Q9UP52	801 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ERVK-11	Q9UQG0	969 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CRYL1	Q9Y2S2	319 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	MED16	Q9Y2X0	877 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	REXO2	Q9Y3B8	237 aa	Known RBP	6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	NOX1	Q9Y5S8	564 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	PDZD2	O15018	2839 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	SPTB	P11277	2137 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CNTRL	Q7Z7A1	2325 aa		6.26	□□□□□ -1.41
CEACAM1-208	ENST00000403461	PCM1	Q15154	2024 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	SVIL	O95425	2214 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	PCNX1	Q96RV3	2341 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CTAGE9	A4FU28	777 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	SYNDIG1L	A6NDD5	238 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	OR2W5	A6NFC9	320 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	URAD	A6NGE7	173 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ZNF860	A6NHJ4	632 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	SAGE2P	A6NJ88	616 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461		A8MVJ9	347 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	BTNL10	A8MVZ5	291 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	NDUFS4	O43181	175 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	B4GALT2	O60909	372 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ERN1	O75460	977 aa	Known RBP	6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	PDE9A	O76083	593 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	SERPIND1	P05546	499 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	MPC1L	P0DKB6	136 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	HIST1H2AD	P20671	130 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ACVR2A	P27037	513 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	GRIA1	P42261	906 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	SKIV2L2	P42285	1042 aa	Known RBP	6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ZFP36L2	P47974	494 aa	Known RBP	6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	SSR4	P51571	173 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CLCN2	P51788	898 aa		6.25	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms