RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 CHPT1Q8WUD6 406 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 TMEM37Q8WXS4 190 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 ZNF689Q96CS4 500 aaPredicted RBP2.23□□□□□ -2.05
CD47-203ENST00000398258 C16orf58Q96GQ5 468 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 COG3Q96JB2 828 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 C18orf12Q96KH6 178 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 CPXM1Q96SM3 734 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 ATF6BQ99941 703 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 RBM4BQ9BQ04 359 aaKnown RBP2.23□□□□□ -2.05
CD47-203ENST00000398258 ST6GALNAC5Q9BVH7 336 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 ABCG4Q9H172 646 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 TUBB1Q9H4B7 451 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 DCTPP1Q9H773 170 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 MOB1AQ9H8S9 216 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 KCNK13Q9HB14 408 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 SLC25A19Q9HC21 320 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 POLE3Q9NRF9 147 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 NDUFA13Q9P0J0 144 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 CTSZQ9UBR2 303 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 CIDEBQ9UHD4 219 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 RARRES3Q9UL19 164 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 ZNF490Q9ULM2 529 aaPredicted RBP2.23□□□□□ -2.05
CD47-203ENST00000398258 NUDCQ9Y266 331 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 SLC6A5Q9Y345 797 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 ZNF175Q9Y473 711 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 PRSS21Q9Y6M0 314 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 MYH15Q9Y2K3 1946 aa2.23□□□□□ -2.05
CD47-203ENST00000398258 NPIPA5A0A0B4J1W7 369 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 RNF222A6NCQ9 220 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 IGLON5A6NGN9 336 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 RNF212BA8MTL3 300 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 NPIPA5E9PKD4 350 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 PDLIM1O00151 329 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 TXNL1O43396 289 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 CRLF1O75462 422 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 PTBP3O95758 552 aaKnown RBP2.22□□□□□ -2.05
CD47-203ENST00000398258 ZCCHC18P0CG32 403 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 GNSP15586 552 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 IL4RP24394 825 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 PTPN6P29350 595 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 PRDX6P30041 224 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 CHRNA3P32297 505 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 MATKP42679 507 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 SGSHP51688 502 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 RPS4XP62701 263 aaKnown RBP2.22□□□□□ -2.05
CD47-203ENST00000398258 MYBPC1Q00872 1141 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 GABPB1Q06547 395 aaPredicted RBP2.22□□□□□ -2.05
CD47-203ENST00000398258 PDZK1IP1Q13113 114 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 ENPP2Q13822 863 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 TRADDQ15628 312 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 CMPK2Q5EBM0 449 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 MUC21Q5SSG8 566 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 DDI2Q5TDH0 399 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 RAET1GQ6H3X3 334 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 STEAP1BQ6NZ63 245 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 ATRAIDQ6UW56 229 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 CWC27Q6UX04 472 aaKnown RBP2.22□□□□□ -2.05
CD47-203ENST00000398258 UNC5DQ6UXZ4 953 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 DPY19L2P2Q6ZN68 376 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 ASRGL1Q7L266 308 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 MCM10Q7L590 875 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 GOLGA7Q7Z5G4 137 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 VPS36Q86VN1 386 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 LINC00518Q8N0U6 118 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 CERS5Q8N5B7 392 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 BCORP1Q8N888 145 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 MAPK1IP1LQ8NDC0 245 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 ANKRD20A12PQ8NF67 263 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 FBXO25Q8TCJ0 367 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 PHYHIPQ92561 330 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 TAF4BQ92750 862 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 SLC25A36Q96CQ1 311 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 TNFRSF13CQ96RJ3 184 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 IWS1Q96ST2 819 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 VGLL1Q99990 258 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 TRIM51Q9BSJ1 452 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 CCSER1Q9C0I3 900 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 RAB17Q9H0T7 212 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 TMEM231Q9H6L2 316 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 NT5DC2Q9H857 520 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 MBD2Q9UBB5 411 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 PLA2G4CQ9UP65 541 aa2.22□□□□□ -2.05
CD47-203ENST00000398258 SALL1Q9NSC2 1324 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 IGHV3-16A0A0C4DH30 117 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 A0A0J9YWU9 116 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 RGSL1A5PLK6 1076 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 ASB14A6NK59 587 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 NEDD8-MDP1E9PL57 170 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 E2F3O00716 465 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 SORBS2O94875 1100 aaKnown RBP2.21□□□□□ -2.06
CD47-203ENST00000398258 APBB3O95704 486 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 SEMA4FO95754 770 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 OAS1P00973 400 aaKnown RBP2.21□□□□□ -2.06
CD47-203ENST00000398258 PTMAP06454 111 aaKnown RBP2.21□□□□□ -2.06
CD47-203ENST00000398258 PROS1P07225 676 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 ADORA3P0DMS8 318 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 GHRP10912 638 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 RALAP11233 206 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 EZRP15311 586 aaKnown RBP2.21□□□□□ -2.06
CD47-203ENST00000398258 CD1DP15813 335 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms