RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 GRK1Q15835 563 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 TBCELQ5QJ74 424 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 CERCAMQ5T4B2 595 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 RSBN1Q5VWQ0 802 aaPredicted RBP6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 SLC27A1Q6PCB7 646 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 FGD2Q7Z6J4 655 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 FAM160A2Q8N612 972 aaPredicted RBP6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 SLC7A14Q8TBB6 771 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 ELP5Q8TE02 316 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 GDF15Q99988 308 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 HINT2Q9BX68 163 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 CHST11Q9NPF2 352 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 BABAM2Q9NXR7 383 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 XPR1Q9UBH6 696 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 CA5BQ9Y2D0 317 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 FIS1Q9Y3D6 152 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 CHD5Q8TDI0 1954 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 A0A087X1B8 175 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 EDDM13A0A1B0GTR0 161 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 C9orf170A2RU37 121 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 ZNF891A8MT65 544 aaPredicted RBP6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 TLX2O43763 284 aaPredicted RBP6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 B3GALT2O43825 422 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 XYLBO75191 536 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 ANXA9O76027 345 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 IFNGP01579 166 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 ZNF865P0CJ78 1059 aaPredicted RBP6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 CDH2P19022 906 aaPredicted RBP6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 AVPR2P30518 371 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 IL2P60568 153 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 GALNT2Q10471 571 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 PWP1Q13610 501 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 APOFQ13790 326 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 PSMD5Q16401 504 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 NRF1Q16656 503 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 PCID2Q5JVF3 399 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 TREML2Q5T2D2 321 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 ZBTB37Q5TC79 503 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 C9orf57Q5W0N0 161 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 RGS7BPQ6MZT1 257 aaPredicted RBP6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 TIPARPQ7Z3E1 657 aaKnown RBP6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 AMIGO2Q86SJ2 522 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 ZC3HC1Q86WB0 502 aaKnown RBP6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 SLITRK4Q8IW52 837 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 NXPE1Q8N323 547 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 FSTL5Q8N475 847 aaPredicted RBP6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 OR2D3Q8NGH3 330 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 HM13Q8TCT9 377 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 ADAMTS14Q8WXS8 1223 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 FCRL2Q96LA5 508 aaPredicted RBP6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 NPAS2Q99743 824 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 HIPK2Q9H2X6 1198 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 GAREM1Q9H706 876 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 POLR1BQ9H9Y6 1135 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 ZDHHC3Q9NYG2 299 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 ZDHHC2Q9UIJ5 367 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 A0A087WXM4 84 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 FAM95CA0A1B0GW59 222 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 DUXAA6NLW8 204 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 I3L521 148 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 PSMD12O00232 456 aaPredicted RBP6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 GRID2O43424 1007 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 HOXC8P31273 242 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 AVPR1AP37288 418 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 CSHL1Q14406 222 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 RFX4Q33E94 735 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 RNF212Q495C1 297 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 AGKQ53H12 422 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 TMEM198Q66K66 360 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 NADSYN1Q6IA69 706 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 LRRC69Q6ZNQ3 347 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 RAB1CQ92928 201 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 ECHDC3Q96DC8 303 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 PPP3R2Q96LZ3 170 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 NPY6RQ99463 290 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 OCSTAMPQ9BR26 566 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 DGCR6LQ9BY27 220 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 DUSP16Q9BY84 665 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 MAGEB5Q9BZ81 275 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 P4HTMQ9NXG6 502 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 ZNF221Q9UK13 617 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 GABRQQ9UN88 632 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 A0A0G2JMP0 313 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 A0A1W2PPC1 479 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 CENPXA8MT69 81 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 MRASO14807 208 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 JCHAINP01591 159 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 TPH1P17752 444 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 DCKP27707 260 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 GMPRP36959 345 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 RPL34P49207 117 aaKnown RBP6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 ARF6P62330 175 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 TXNL4AP83876 142 aaKnown RBP6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 MS4A2Q01362 244 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 SLC9A3R2Q15599 337 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 MGAT5BQ3V5L5 792 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 MTX3Q5HYI7 312 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 ATG9BQ674R7 924 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 OVOS1Q6IE37 1185 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 BPIFB1Q8TDL5 484 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms