RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 CCDC190Q86UF4 302 aa10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 AMZ2Q86W34 360 aa10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 CCDC71Q8IV32 467 aaPredicted RBP10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 ZNF480Q8WV37 535 aa10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 BRD7Q9NPI1 651 aa10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 DMRT3Q9NQL9 472 aa10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 NUDT15Q9NV35 164 aa10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 PPIEQ9UNP9 301 aaKnown RBP10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 UNCXA6NJT0 531 aa10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 ICMTO60725 284 aa10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 ETHE1O95571 254 aa10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 HMGN1P05114 100 aa10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 ANXA3P12429 323 aa10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 DNASE1P24855 282 aa10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 GPR4P46093 362 aa10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 CSNK1DP48730 415 aa10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 CCR8P51685 355 aa10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 SLC9A5Q14940 896 aa10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 SYPL1Q16563 259 aa10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 ZNF385BQ569K4 471 aa10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 FAM205BPQ63HN1 556 aa10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 PODNL1Q6PEZ8 512 aa10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 IKBIPQ70UQ0 350 aa10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 PLCZ1Q86YW0 608 aa10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 RBM45Q8IUH3 476 aaKnown RBP10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 ZNF557Q8N988 423 aaPredicted RBP10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 CCDC120Q96HB5 630 aa10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 FAM46AQ96IP4 442 aaKnown RBP10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 OPALINQ96PE5 141 aa10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 GALNT9Q9HCQ5 603 aa10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 MAU2Q9Y6X3 613 aa10.56□□□□□ -0.72
CSGALNACT1-202ENST00000397998 UBE2QL1A1L167 161 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 TBC1D3BA6NDS4 549 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 EIF4EBP2Q13542 120 aaPredicted RBP10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 IFNL1Q8IU54 200 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 LINC00471Q8N535 108 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 SNX33Q8WV41 574 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 SUSD6Q92537 303 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 ERMAPQ96PL5 475 aaPredicted RBP10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 OR2A14Q96R47 310 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 TMEM184CQ9NVA4 438 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 ITM2BQ9Y287 266 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 TRBV5-3A0A0A0MS03 114 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 HYKKA2RU49 373 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 TMEM202A6NGA9 273 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 RIIAD1A6NNX1 92 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 LEFTY2O00292 366 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 POLR1CO15160 346 aaPredicted RBP10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 ACADMP11310 421 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 DRD5P21918 477 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 IMPA1P29218 277 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 ACVR1BP36896 505 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 RNF144AP50876 292 aaPredicted RBP10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 LRRC32Q14392 662 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 TRAM2Q15035 370 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 GPR68Q15743 365 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 GJD3Q8N144 294 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 FAM109AQ8N4B1 249 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 KIAA1958Q8N8K9 716 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 OR4F15Q8NGB8 312 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 SLC38A5Q8WUX1 472 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 CDCA4Q9BXL8 241 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 CACNG6Q9BXT2 260 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 TRIM36Q9NQ86 728 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 QPCTLQ9NXS2 382 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 CSNK1G3Q9Y6M4 447 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 H0YIV9 168 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 CXCL14O95715 111 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 PCCBP05166 539 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 TYRP14679 529 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 LHCGRP22888 699 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 HOXC5Q00444 222 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 ZNF33BQ06732 778 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 SLX4IPQ5VYV7 408 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 IL20RBQ6UXL0 311 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 GLCCI1Q86VQ1 547 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 TRAM1L1Q8N609 369 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 DHRS1Q96LJ7 313 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 MCHR1Q99705 422 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 SLITRK2Q9H156 845 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 FBXL12Q9NXK8 326 aa10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 MRPL15Q9P015 296 aaKnown RBP10.55□□□□□ -0.72
CSGALNACT1-202ENST00000397998 LTBP4Q8N2S1 1624 aa10.54□□□□□ -0.72
CSGALNACT1-202ENST00000397998 ARID1BQ8NFD5 2236 aaPredicted RBP10.54□□□□□ -0.72
CSGALNACT1-202ENST00000397998 GNB5O14775 395 aa10.54□□□□□ -0.72
CSGALNACT1-202ENST00000397998 FCER2P06734 321 aa10.54□□□□□ -0.72
CSGALNACT1-202ENST00000397998 C1SP09871 688 aa10.54□□□□□ -0.72
CSGALNACT1-202ENST00000397998 CYBAP13498 195 aa10.54□□□□□ -0.72
CSGALNACT1-202ENST00000397998 HSF2Q03933 536 aa10.54□□□□□ -0.72
CSGALNACT1-202ENST00000397998 MGAT3Q09327 533 aa10.54□□□□□ -0.72
CSGALNACT1-202ENST00000397998 TRIM71Q2Q1W2 868 aaKnown RBP10.54□□□□□ -0.72
CSGALNACT1-202ENST00000397998 TMEM44Q2T9K0 475 aa10.54□□□□□ -0.72
CSGALNACT1-202ENST00000397998 LY6G5CQ5SRR4 150 aa10.54□□□□□ -0.72
CSGALNACT1-202ENST00000397998 PRPF38BQ5VTL8 546 aaKnown RBP10.54□□□□□ -0.72
CSGALNACT1-202ENST00000397998 MTFR2Q6P444 385 aa10.54□□□□□ -0.72
CSGALNACT1-202ENST00000397998 BEST4Q8NFU0 473 aa10.54□□□□□ -0.72
CSGALNACT1-202ENST00000397998 OR4C6Q8NH72 309 aa10.54□□□□□ -0.72
CSGALNACT1-202ENST00000397998 EGLN3Q9H6Z9 239 aa10.54□□□□□ -0.72
CSGALNACT1-202ENST00000397998 FOLH1BQ9HBA9 442 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms