RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 S100A14Q9HCY8 104 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 GPATCH2Q9NW75 528 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 SLC39A1Q9NY26 324 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 P2RX2Q9UBL9 471 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 EGFL7Q9UHF1 273 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 ANGPTL2Q9UKU9 493 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 CFL2Q9Y281 166 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 TMEM184BQ9Y519 407 aaPredicted RBP17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 PCDHGA3Q9Y5H0 932 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 SPTBP11277 2137 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 SEC16AO15027 2179 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 FAM227AF5H4B4 570 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 B4GALT2O60909 372 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 CREG1O75629 220 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 SORBS2O94875 1100 aaKnown RBP17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 AK1P00568 194 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 ARAFP10398 606 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 NT5EP21589 574 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 MATN1P21941 496 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 MC3RP41968 323 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 PSPHP78330 225 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 MAT1AQ00266 395 aaKnown RBP17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 ADRM1Q16186 407 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 ZNF385CQ66K41 422 aaPredicted RBP17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 CCDC80Q76M96 950 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 RAB11FIP2Q7L804 512 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 OVCH1Q7RTY7 1134 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 PATL1Q86TB9 770 aaKnown RBP17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 VWA5B2Q8N398 1253 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 CDRT4Q8N9R6 151 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 OR5AK3PQ8NH89 298 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 NETO1Q8TDF5 533 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 PMM1Q92871 262 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 RIT1Q92963 219 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 FAM162AQ96A26 154 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 MAGIXQ9H6Y5 334 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 CXorf21Q9HAI6 301 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 EXD2Q9NVH0 621 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 ARMC1Q9NVT9 282 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 RAPGEFL1Q9UHV5 662 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 LOXL2Q9Y4K0 774 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 MAU2Q9Y6X3 613 aa17.82■□□□□ 0.44
TSPAN4-204ENST00000397404 IGKV3D-11A0A0A0MRZ8 115 aa17.81■□□□□ 0.44
TSPAN4-204ENST00000397404 DHRS12A0PJE2 317 aa17.81■□□□□ 0.44
TSPAN4-204ENST00000397404 C5orf58C9J3I9 102 aa17.81■□□□□ 0.44
TSPAN4-204ENST00000397404 UPK1AO00322 258 aa17.81■□□□□ 0.44
TSPAN4-204ENST00000397404 CASC3O15234 703 aaKnown RBP17.81■□□□□ 0.44
TSPAN4-204ENST00000397404 CDK6Q00534 326 aa17.81■□□□□ 0.44
TSPAN4-204ENST00000397404 ELAVL1Q15717 326 aaKnown RBP17.81■□□□□ 0.44
TSPAN4-204ENST00000397404 SNCBQ16143 134 aa17.81■□□□□ 0.44
TSPAN4-204ENST00000397404 ATAD3BQ5T9A4 648 aa17.81■□□□□ 0.44
TSPAN4-204ENST00000397404 REEP3Q6NUK4 255 aa17.81■□□□□ 0.44
TSPAN4-204ENST00000397404 FAM180BQ6P0A1 224 aa17.81■□□□□ 0.44
TSPAN4-204ENST00000397404 FKBP9P1Q75LS8 142 aa17.81■□□□□ 0.44
TSPAN4-204ENST00000397404 PTOV1Q86YD1 416 aa17.81■□□□□ 0.44
TSPAN4-204ENST00000397404 ZC3H7AQ8IWR0 971 aaKnown RBP17.81■□□□□ 0.44
TSPAN4-204ENST00000397404 FIG4Q92562 907 aa17.81■□□□□ 0.44
TSPAN4-204ENST00000397404 DAZLQ92904 295 aaKnown RBP17.81■□□□□ 0.44
TSPAN4-204ENST00000397404 PTCHD1Q96NR3 888 aa17.81■□□□□ 0.44
TSPAN4-204ENST00000397404 STACQ99469 402 aa17.81■□□□□ 0.44
TSPAN4-204ENST00000397404 SPATA5L1Q9BVQ7 753 aa17.81■□□□□ 0.44
TSPAN4-204ENST00000397404 TRIM8Q9BZR9 551 aa17.81■□□□□ 0.44
TSPAN4-204ENST00000397404 ADAP2Q9NPF8 381 aa17.81■□□□□ 0.44
TSPAN4-204ENST00000397404 CCM2LQ9NUG4 571 aaPredicted RBP17.81■□□□□ 0.44
TSPAN4-204ENST00000397404 DCAF13Q9NV06 445 aaKnown RBP17.81■□□□□ 0.44
TSPAN4-204ENST00000397404 FAM86C1Q9NVL1 165 aa17.81■□□□□ 0.44
TSPAN4-204ENST00000397404 TOR4AQ9NXH8 423 aa17.81■□□□□ 0.44
TSPAN4-204ENST00000397404 MAT2BQ9NZL9 334 aa17.81■□□□□ 0.44
TSPAN4-204ENST00000397404 C6orf203Q9P0P8 240 aaPredicted RBP17.81■□□□□ 0.44
TSPAN4-204ENST00000397404 STOML1Q9UBI4 398 aa17.81■□□□□ 0.44
TSPAN4-204ENST00000397404 ZNF639Q9UID6 485 aa17.81■□□□□ 0.44
TSPAN4-204ENST00000397404 NUP210LQ5VU65 1888 aa17.8■□□□□ 0.44
TSPAN4-204ENST00000397404 COL27A1Q8IZC6 1860 aaPredicted RBP17.8■□□□□ 0.44
TSPAN4-204ENST00000397404 TCRBV16S1A1N1A0A5B0 115 aa17.8■□□□□ 0.44
TSPAN4-204ENST00000397404 MEN1O00255 615 aa17.8■□□□□ 0.44
TSPAN4-204ENST00000397404 HMGN2P05204 90 aaKnown RBP17.8■□□□□ 0.44
TSPAN4-204ENST00000397404 GUSBP08236 651 aa17.8■□□□□ 0.44
TSPAN4-204ENST00000397404 ETFAP13804 333 aa17.8■□□□□ 0.44
TSPAN4-204ENST00000397404 MSX2P35548 267 aaPredicted RBP17.8■□□□□ 0.44
TSPAN4-204ENST00000397404 SCARB2Q14108 478 aa17.8■□□□□ 0.44
TSPAN4-204ENST00000397404 FHL5Q5TD97 284 aa17.8■□□□□ 0.44
TSPAN4-204ENST00000397404 CDC73Q6P1J9 531 aa17.8■□□□□ 0.44
TSPAN4-204ENST00000397404 OR4N5Q8IXE1 308 aa17.8■□□□□ 0.44
TSPAN4-204ENST00000397404 METTL27Q8N6F8 245 aaPredicted RBP17.8■□□□□ 0.44
TSPAN4-204ENST00000397404 OR14A16Q8NHC5 309 aa17.8■□□□□ 0.44
TSPAN4-204ENST00000397404 WDR36Q8NI36 951 aaKnown RBP17.8■□□□□ 0.44
TSPAN4-204ENST00000397404 PNPT1Q8TCS8 783 aaKnown RBP17.8■□□□□ 0.44
TSPAN4-204ENST00000397404 BTBD2Q9BX70 525 aa17.8■□□□□ 0.44
TSPAN4-204ENST00000397404 DUSP22Q9NRW4 184 aa17.8■□□□□ 0.44
TSPAN4-204ENST00000397404 RYDENQ9NUL5 291 aaKnown RBP17.8■□□□□ 0.44
TSPAN4-204ENST00000397404 IFT80Q9P2H3 777 aaPredicted RBP17.8■□□□□ 0.44
TSPAN4-204ENST00000397404 PRODH2Q9UF12 536 aa17.8■□□□□ 0.44
TSPAN4-204ENST00000397404 WDR87Q6ZQQ6 2873 aa17.79■□□□□ 0.44
TSPAN4-204ENST00000397404 VSTM2BA6NLU5 285 aa17.79■□□□□ 0.44
TSPAN4-204ENST00000397404 C9J4A7 227 aa17.79■□□□□ 0.44
TSPAN4-204ENST00000397404 HNRNPRO43390 633 aaKnown RBP17.79■□□□□ 0.44
TSPAN4-204ENST00000397404 PRAMEF2O60811 474 aa17.79■□□□□ 0.44
TSPAN4-204ENST00000397404 CSO75390 466 aaKnown RBP17.79■□□□□ 0.44
TSPAN4-204ENST00000397404 JMJD7P0C870 316 aa17.79■□□□□ 0.44
TSPAN4-204ENST00000397404 KDELR2P33947 212 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms