RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 FRYLO94915 3013 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 MYO15AQ9UKN7 3530 aa12.74□□□□□ -0.37
MCF2L-209ENST00000397036 FAM186AA6NE01 2351 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 TCRBV5S2A0A599 114 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 VSTM2BA6NLU5 285 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 DUXAA6NLW8 204 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 MEN1O00255 615 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 AGR2O95994 175 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 CCL4P13236 92 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 ETFAP13804 333 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 ATP6V1B2P21281 511 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 SLC7A1P30825 629 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 MC3RP41968 323 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 PRIM2P49643 509 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 DSTNP60981 165 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 AP2B1P63010 937 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 BTG2P78543 158 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 RHAGQ02094 409 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 MYBPC3Q14896 1274 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 EXOSC6Q5RKV6 272 aaKnown RBP12.73□□□□□ -0.37
MCF2L-209ENST00000397036 INTS11Q5TA45 600 aaKnown RBP12.73□□□□□ -0.37
MCF2L-209ENST00000397036 PRAMEF8Q5VWM4 474 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 PRAMEF7Q5VXH5 474 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 TMEM107Q6UX40 140 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 SPATA24Q86W54 205 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 LGI4Q8N135 537 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 METTL27Q8N6F8 245 aaPredicted RBP12.73□□□□□ -0.37
MCF2L-209ENST00000397036 PAPD5Q8NDF8 572 aaKnown RBP12.73□□□□□ -0.37
MCF2L-209ENST00000397036 OR7G2Q8NG99 324 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 PNPT1Q8TCS8 783 aaKnown RBP12.73□□□□□ -0.37
MCF2L-209ENST00000397036 GIMAP5Q96F15 307 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 SLC35G5Q96KT7 338 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 DDA1Q9BW61 102 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 APMAPQ9HDC9 416 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 CCM2LQ9NUG4 571 aaPredicted RBP12.73□□□□□ -0.37
MCF2L-209ENST00000397036 DCAF13Q9NV06 445 aaKnown RBP12.73□□□□□ -0.37
MCF2L-209ENST00000397036 DDX18Q9NVP1 670 aaKnown RBP12.73□□□□□ -0.37
MCF2L-209ENST00000397036 SLC39A1Q9NY26 324 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 PCDHGA8Q9Y5G5 932 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 PCDHGA3Q9Y5H0 932 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 ADAMTS20P59510 1910 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 GVINP1Q7Z2Y8 2422 aa12.73□□□□□ -0.37
MCF2L-209ENST00000397036 TGFBR3LH3BV60 316 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 OR10H2O60403 315 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 HMGN2P05204 90 aaKnown RBP12.72□□□□□ -0.37
MCF2L-209ENST00000397036 S1PR1P21453 382 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 NT5EP21589 574 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 MATN1P21941 496 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 KDELR2P33947 212 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 MAP3K8P41279 467 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 MAN2A2P49641 1150 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 ID2Q02363 134 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 TP53BP2Q13625 1128 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 ERV3-1Q14264 604 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 LTB4RQ15722 352 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 C1orf189Q5VU69 101 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 FBXW10Q5XX13 1052 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 AP1ARQ63HQ0 302 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 ANGPTL8Q6UXH0 198 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 CYP2R1Q6VVX0 501 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 ZNF517Q6ZMY9 492 aaPredicted RBP12.72□□□□□ -0.37
MCF2L-209ENST00000397036 RAB11FIP2Q7L804 512 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 SPPL2CQ8IUH8 684 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 GALNT12Q8IXK2 581 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 HORMAD2Q8N7B1 307 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 KAT2AQ92830 837 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 CLIP3Q96DZ5 547 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 RNF145Q96MT1 663 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 PTCHD1Q96NR3 888 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 DGAT2Q96PD7 388 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 MS4A4EQ96PG1 132 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 TAAR9Q96RI9 348 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 ACTRT3Q9BYD9 372 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 NECTIN3Q9NQS3 549 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 ARMC1Q9NVT9 282 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 RAPGEFL1Q9UHV5 662 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 LIPT1Q9Y234 373 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 ZFHX2Q9C0A1 2572 aaPredicted RBP12.72□□□□□ -0.37
MCF2L-209ENST00000397036 PTPRZ1P23471 2315 aaPredicted RBP12.72□□□□□ -0.37
MCF2L-209ENST00000397036 CCDC187A0A096LP49 1063 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 TCRBV16S1A1N1A0A5B0 115 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 TTC36A6NLP5 189 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 HMGN4O00479 90 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 TM4SF5O14894 197 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 KRT36O76013 467 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 RECKO95980 971 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 KLK3P07288 261 aaPredicted RBP12.72□□□□□ -0.37
MCF2L-209ENST00000397036 CD63P08962 238 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 NUDT7P0C024 238 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 TFPTP0C1Z6 253 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 AGXTP21549 392 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 KHKP50053 298 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 PCBP3P57721 371 aaKnown RBP12.72□□□□□ -0.37
MCF2L-209ENST00000397036 CDK6Q00534 326 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 OCA2Q04671 838 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 FUT7Q11130 342 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 GNA13Q14344 377 aa12.72□□□□□ -0.37
MCF2L-209ENST00000397036 TRMT12Q53H54 448 aaKnown RBP12.72□□□□□ -0.37
MCF2L-209ENST00000397036 DCAF12Q5T6F0 453 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms