RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 AMY2AP04746 511 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 RNASE10Q5GAN6 216 aaKnown RBP13.38□□□□□ -0.27
COL4A3-202ENST00000396578 CLDN19Q8N6F1 224 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.38□□□□□ -0.27
COL4A3-202ENST00000396578 CPNE5Q9HCH3 593 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 C2orf42Q9NWW7 574 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 TMEM59LQ9UK28 342 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 NFAT5O94916 1531 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 IRS2Q9Y4H2 1338 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 PROZP22891 400 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 MYF6P23409 242 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 ACVRL1P37023 503 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 CDK3Q00526 305 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 DYRK1AQ13627 763 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 C6orf136Q5SQH8 315 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 PGM2L1Q6PCE3 622 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 OR13J1Q8NGT2 312 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 KCNIP1Q9NZI2 227 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 TAS2R20P59543 309 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 GALNT2Q10471 571 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 PITX2Q99697 317 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 CACNG4Q9UBN1 327 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 A0A1W2PQL4 384 aaPredicted RBP13.37□□□□□ -0.27
COL4A3-202ENST00000396578 FASLGP48023 281 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 BMXP51813 675 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 DEFB115Q30KQ5 88 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 RCBTB1Q8NDN9 531 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 TERB2Q8NHR7 220 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 MSLNLQ96KJ4 702 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 BCL7BQ9BQE9 202 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 ARMC1Q9NVT9 282 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 TTLL8A6PVC2 850 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 OIP5O43482 229 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 SOCS5O75159 536 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 AQP2P41181 271 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 NR4A2P43354 598 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 MTNR1AP48039 350 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 ID2Q02363 134 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 C14orf28Q4W4Y0 310 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.37□□□□□ -0.27
COL4A3-202ENST00000396578 TRIB3Q96RU7 358 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 OR8D2Q9GZM6 311 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 F5H5P2 479 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 ZBTB48P10074 688 aaPredicted RBP13.37□□□□□ -0.27
COL4A3-202ENST00000396578 FGF3P11487 239 aaPredicted RBP13.37□□□□□ -0.27
COL4A3-202ENST00000396578 PRMT2P55345 433 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 FGFBP1Q14512 234 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 DCST2Q5T1A1 773 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 ZNF776Q68DI1 518 aaPredicted RBP13.37□□□□□ -0.27
COL4A3-202ENST00000396578 PRSS48Q7RTY5 328 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 MAPK15Q8TD08 544 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 KLRG1Q96E93 195 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 TXN2Q99757 166 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 NAA11Q9BSU3 229 aaPredicted RBP13.37□□□□□ -0.27
COL4A3-202ENST00000396578 CERS4Q9HA82 394 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 NDUFV2P19404 249 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 HLCSP50747 726 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 SLAMF1Q13291 335 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 TMEM173Q86WV6 379 aaPredicted RBP13.37□□□□□ -0.27
COL4A3-202ENST00000396578 SYT14Q8NB59 555 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 C3orf58Q8NDZ4 430 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 KCNJ9Q92806 393 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 CHFRQ96EP1 664 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 SOX17Q9H6I2 414 aaPredicted RBP13.37□□□□□ -0.27
COL4A3-202ENST00000396578 RFPL3O75679 317 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 APOFQ13790 326 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 GBX1Q14549 363 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 ZNF516Q92618 1163 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 SLC41A3Q96GZ6 507 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 ZNF559Q9BR84 538 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 NLKQ9UBE8 527 aa13.37□□□□□ -0.27
COL4A3-202ENST00000396578 ARPC5O15511 151 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 ADH1BP00325 375 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 CDK1P06493 297 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 GNB3P16520 340 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 CHATP28329 748 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 ZFAND4Q86XD8 727 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 CELF5Q8N6W0 485 aaKnown RBP13.36□□□□□ -0.27
COL4A3-202ENST00000396578 OR51A7Q8NH64 312 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 MMABQ96EY8 250 aaPredicted RBP13.36□□□□□ -0.27
COL4A3-202ENST00000396578 RLIMQ9NVW2 624 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 KLHL13Q9P2N7 655 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 NME7Q9Y5B8 376 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 IGLV3-22A0A075B6J6 115 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 FAM230AA0A1W2PPH8 454 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 SMPD1P17405 629 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 PITPNBP48739 271 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 HTD2P86397 168 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 COQ5Q5HYK3 327 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 GOLM1Q8NBJ4 401 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 TRMT10AQ8TBZ6 339 aaKnown RBP13.36□□□□□ -0.27
COL4A3-202ENST00000396578 SUSD3Q96L08 255 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 TMEM248Q9NWD8 314 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 TMEM98Q9Y2Y6 226 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 PARP4Q9UKK3 1724 aaKnown RBP13.36□□□□□ -0.27
COL4A3-202ENST00000396578 A0A0U1RQK1 487 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 UBFD1O14562 309 aaKnown RBP13.36□□□□□ -0.27
COL4A3-202ENST00000396578 PBX2P40425 430 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 RAB5CP51148 216 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 HNRNPKP61978 463 aaKnown RBP eCLIP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms