RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 KIAA0907Q7Z7F0 614 aaPredicted RBP3.22□□□□□ -1.89
VPS13C-203ENST00000395896 OAFQ86UD1 273 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 EGFL6Q8IUX8 553 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 PARP8Q8N3A8 854 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 FAM156AQ8NDB6 213 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 LRTOMTQ8WZ04 291 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 NCSTNQ92542 709 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 S100A13Q99584 98 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 SARGQ9BW04 601 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 HDHD5Q9BXW7 423 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 RARRES3Q9UL19 164 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 PAIP2BQ9ULR5 123 aaKnown RBP3.22□□□□□ -1.89
VPS13C-203ENST00000395896 SUFUQ9UMX1 484 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 BTBD3Q9Y2F9 522 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 SIT1Q9Y3P8 196 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 LTBP2Q14767 1821 aa3.22□□□□□ -1.89
VPS13C-203ENST00000395896 NME4O00746 187 aa3.21□□□□□ -1.89
VPS13C-203ENST00000395896 C1QAP02745 245 aa3.21□□□□□ -1.89
VPS13C-203ENST00000395896 SOX9P48436 509 aa3.21□□□□□ -1.89
VPS13C-203ENST00000395896 CTSCP53634 463 aa3.21□□□□□ -1.89
VPS13C-203ENST00000395896 CDH12P55289 794 aa3.21□□□□□ -1.89
VPS13C-203ENST00000395896 GPR153Q6NV75 609 aa3.21□□□□□ -1.89
VPS13C-203ENST00000395896 NUP54Q7Z3B4 507 aa3.21□□□□□ -1.89
VPS13C-203ENST00000395896 MINDY2Q8NBR6 621 aa3.21□□□□□ -1.89
VPS13C-203ENST00000395896 MMABQ96EY8 250 aaPredicted RBP3.21□□□□□ -1.89
VPS13C-203ENST00000395896 ZNF300Q96RE9 604 aaPredicted RBP3.21□□□□□ -1.89
VPS13C-203ENST00000395896 LMF2Q9BU23 707 aaKnown RBP3.21□□□□□ -1.89
VPS13C-203ENST00000395896 THSD1Q9NS62 852 aa3.21□□□□□ -1.89
VPS13C-203ENST00000395896 LRRC14BA6NHZ5 514 aa3.21□□□□□ -1.89
VPS13C-203ENST00000395896 MCIDASD6RGH6 385 aa3.21□□□□□ -1.89
VPS13C-203ENST00000395896 ZNF195O14628 629 aa3.21□□□□□ -1.89
VPS13C-203ENST00000395896 NME1P15531 152 aaKnown RBP3.21□□□□□ -1.89
VPS13C-203ENST00000395896 NR4A1P22736 598 aa3.21□□□□□ -1.89
VPS13C-203ENST00000395896 PRKAR1BP31321 381 aa3.21□□□□□ -1.89
VPS13C-203ENST00000395896 FAUP35544 74 aaKnown RBP3.21□□□□□ -1.89
VPS13C-203ENST00000395896 EMP3P54852 163 aa3.21□□□□□ -1.89
VPS13C-203ENST00000395896 ADAM15Q13444 863 aa3.21□□□□□ -1.89
VPS13C-203ENST00000395896 TMED1Q13445 227 aa3.21□□□□□ -1.89
VPS13C-203ENST00000395896 GRB7Q14451 532 aa3.21□□□□□ -1.89
VPS13C-203ENST00000395896 PTCRAQ6ISU1 281 aaPredicted RBP3.21□□□□□ -1.89
VPS13C-203ENST00000395896 CHMP1BQ7LBR1 199 aa3.21□□□□□ -1.89
VPS13C-203ENST00000395896 LSMEM2Q8N112 164 aa3.21□□□□□ -1.89
VPS13C-203ENST00000395896 ZNF548Q8NEK5 533 aaPredicted RBP3.21□□□□□ -1.89
VPS13C-203ENST00000395896 NUP43Q8NFH3 380 aa3.21□□□□□ -1.89
VPS13C-203ENST00000395896 TP53INP1Q96A56 240 aa3.21□□□□□ -1.89
VPS13C-203ENST00000395896 PNPLA2Q96AD5 504 aa3.21□□□□□ -1.89
VPS13C-203ENST00000395896 PDXPQ96GD0 296 aa3.21□□□□□ -1.89
VPS13C-203ENST00000395896 OR1F2PQ96R84 312 aa3.21□□□□□ -1.89
VPS13C-203ENST00000395896 GABRG3Q99928 467 aa3.21□□□□□ -1.89
VPS13C-203ENST00000395896 MS4A8Q9BY19 250 aa3.21□□□□□ -1.89
VPS13C-203ENST00000395896 HCSTQ9UBK5 93 aa3.21□□□□□ -1.89
VPS13C-203ENST00000395896 HAT1O14929 419 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 HBA1P69905 142 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 RASGEF1BQ0VAM2 473 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 RGNQ15493 299 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 SNAP47Q5SQN1 464 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 TRIQKQ629K1 86 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 LRRC56Q8IYG6 542 aaPredicted RBP3.21□□□□□ -1.9
VPS13C-203ENST00000395896 OR5AR1Q8NGP9 310 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 ACOT11Q8WXI4 607 aaPredicted RBP3.21□□□□□ -1.9
VPS13C-203ENST00000395896 TFAP2CQ92754 450 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 TMBIM1Q969X1 311 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 TAPBPLQ9BX59 468 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 LMAN1LQ9HAT1 526 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 POLR1DQ9Y2S0 133 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 AQP9O43315 295 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF749O43361 778 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 CISD3P0C7P0 127 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 GLB1P16278 677 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 RAB25P57735 213 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 BTN3A2P78410 334 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 ATP1A4Q13733 1029 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 DGCR6Q14129 220 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 NSDHLQ15738 373 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 ARHGAP11AQ6P4F7 1023 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 FAM83HQ6ZRV2 1179 aaPredicted RBP3.21□□□□□ -1.9
VPS13C-203ENST00000395896 TOE1Q96GM8 510 aaKnown RBP3.21□□□□□ -1.9
VPS13C-203ENST00000395896 CNPPD1Q9BV87 410 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 PCOLCE2Q9UKZ9 415 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 AIREO43918 545 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 OR6B1O95007 311 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 FURINP09958 794 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 PRR35P0CG20 571 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 MYF6P23409 242 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 MYL9P24844 172 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 SOX11P35716 441 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 CCR10P46092 362 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 MASP1P48740 699 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 CDKN1CP49918 316 aaPredicted RBP3.21□□□□□ -1.9
VPS13C-203ENST00000395896 KIAA0895LQ68EN5 471 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 PRSS48Q7RTY5 328 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 FUNDC1Q8IVP5 155 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 OR4C15Q8NGM1 316 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 CNDP2Q96KP4 475 aaKnown RBP3.21□□□□□ -1.9
VPS13C-203ENST00000395896 STACQ99469 402 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 MKRN2Q9H000 416 aaKnown RBP3.21□□□□□ -1.9
VPS13C-203ENST00000395896 TMEM98Q9Y2Y6 226 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 PEPDP12955 493 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 NDUFAF6Q330K2 333 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 ARHGAP40Q5TG30 622 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms