RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 RBM24Q9BX46 236 aaKnown RBP4.22□□□□□ -1.73
HMGB1P10-201ENST00000395823 RIBC2Q9H4K1 309 aa4.22□□□□□ -1.73
HMGB1P10-201ENST00000395823 SUDS3Q9H7L9 328 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P10-201ENST00000395823 ZNF696Q9H7X3 374 aa4.22□□□□□ -1.73
HMGB1P10-201ENST00000395823 NMUR1Q9HB89 426 aa4.22□□□□□ -1.73
HMGB1P10-201ENST00000395823 SPHK2Q9NRA0 654 aa4.22□□□□□ -1.73
HMGB1P10-201ENST00000395823 RBM28Q9NW13 759 aaKnown RBP4.22□□□□□ -1.73
HMGB1P10-201ENST00000395823 TEX10Q9NXF1 929 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P10-201ENST00000395823 GTSE1Q9NYZ3 720 aa4.22□□□□□ -1.73
HMGB1P10-201ENST00000395823 CACNG5Q9UF02 275 aa4.22□□□□□ -1.73
HMGB1P10-201ENST00000395823 PCSK1NQ9UHG2 260 aa4.22□□□□□ -1.73
HMGB1P10-201ENST00000395823 BAIAP2L1Q9UHR4 511 aa4.22□□□□□ -1.73
HMGB1P10-201ENST00000395823 DUSP12Q9UNI6 340 aa4.22□□□□□ -1.73
HMGB1P10-201ENST00000395823 B9D1Q9UPM9 204 aa4.22□□□□□ -1.73
HMGB1P10-201ENST00000395823 MRPS28Q9Y2Q9 187 aaKnown RBP4.22□□□□□ -1.73
HMGB1P10-201ENST00000395823 IGHV3-38A0A0C4DH36 116 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 TRBV5-4A0A0C4DH59 114 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 TRIM49BA6NDI0 452 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 SDHDO14521 159 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 OR4F21O95013 312 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 PCCBP05166 539 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 CFC1BP0CG36 223 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 CFC1P0CG37 223 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 EPB41P11171 864 aaKnown RBP4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 ZNF26P17031 533 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 PRKACGP22612 351 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 MATKP42679 507 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 SLC1A6P48664 564 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 NDST2P52849 883 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 CRYBA2P53672 197 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 CDKL1Q00532 357 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 SNTB2Q13425 540 aaKnown RBP4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 KRTAP24-1Q3LI83 254 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 USH1GQ495M9 461 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 TCHHL1Q5QJ38 904 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 C3P1Q6ZMU1 363 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 RUFY3Q7L099 469 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 LHFPL4Q7Z7J7 247 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 DENND6BQ8NEG7 585 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 OR10G7Q8NGN6 311 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 THRSPQ92748 146 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 C4orf36Q96KX1 117 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 KRT12Q99456 494 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 DGCR6LQ9BY27 220 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 KRTAP4-2Q9BYR5 136 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 VPS33BQ9H267 617 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 DCTPP1Q9H773 170 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 MED20Q9H944 212 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 KCNK13Q9HB14 408 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 FGF22Q9HCT0 170 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 PROCRQ9UNN8 238 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 KIF3AQ9Y496 699 aa4.21□□□□□ -1.74
HMGB1P10-201ENST00000395823 ATAD2BQ9ULI0 1458 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 KDRP35968 1356 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 ERICH4A6NGS2 130 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 MPTX1A8MV57 137 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 H3BMH7 237 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 IMPA2O14732 288 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 INPP4BO15327 924 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 NXPH2O95156 264 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 OAS1P00973 400 aaKnown RBP4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 ZSCAN5DPP0CG00 497 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 THRBP10828 461 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 AOC1P19801 751 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 HNRNPA2B1P22626 353 aaKnown RBP4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 PAX7P23759 505 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 DPP4P27487 766 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 FCGR2CP31995 323 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 CD151P48509 253 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 PEX3P56589 373 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 CYCSP99999 105 aaKnown RBP4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 TRIP10Q15642 601 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 HAGHQ16775 308 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 NADK2Q4G0N4 442 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 WDR25Q64LD2 544 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 ASPHD2Q6ICH7 369 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 GPBP1Q86WP2 473 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 CARM1Q86X55 608 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 TBC1D10CQ8IV04 446 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 CENPLQ8N0S6 344 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 FAM133AQ8N9E0 248 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 ZNRF1Q8ND25 227 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 STKLD1Q8NE28 680 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 NFAM1Q8NET5 270 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 OR1K1Q8NGR3 316 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 OR10T2Q8NGX3 314 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 BRSK1Q8TDC3 778 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 GIMAP1Q8WWP7 306 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 CTNNBL1Q8WYA6 563 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 ALKBH3Q96Q83 286 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 USP28Q96RU2 1077 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 NRN1Q9NPD7 142 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 AGPAT5Q9NUQ2 364 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 RDH8Q9NYR8 311 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 IKZF3Q9UKT9 509 aa4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 NIP7Q9Y221 180 aaKnown RBP eCLIP4.2□□□□□ -1.74
HMGB1P10-201ENST00000395823 CUX2O14529 1486 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 A0A087WYN8 130 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 EME2A4GXA9 379 aaPredicted RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms