RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 ZNF385BQ569K4 471 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 LYPLAL1Q5VWZ2 237 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 CDC73Q6P1J9 531 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 ZNF367Q7RTV3 350 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 SERPINA11Q86U17 422 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.55□□□□□ -0.4
NFKB1-202ENST00000394820 ISG20Q96AZ6 181 aaKnown RBP12.55□□□□□ -0.4
NFKB1-202ENST00000394820 SLC6A16Q9GZN6 736 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 OSGIN1Q9UJX0 560 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 HCN2Q9UL51 889 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 SCN5AQ14524 2016 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 PTPRDP23468 1912 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 GATBO75879 557 aaKnown RBP12.55□□□□□ -0.4
NFKB1-202ENST00000394820 SOX30O94993 753 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 EPHX1P07099 455 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 C1SP09871 688 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 ITGB8P26012 769 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 MAT2AP31153 395 aaKnown RBP12.55□□□□□ -0.4
NFKB1-202ENST00000394820 SPINT3P49223 89 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 MAB21L1Q13394 359 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 GRIN2CQ14957 1233 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 MACC1Q6ZN28 852 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 C6orf120Q7Z4R8 191 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 SPRED2Q7Z698 418 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 ADGRD2Q7Z7M1 963 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 SYT9Q86SS6 491 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 SERPINA12Q8IW75 414 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 OR4N5Q8IXE1 308 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 PIAS4Q8N2W9 510 aaPredicted RBP12.55□□□□□ -0.4
NFKB1-202ENST00000394820 OR51A7Q8NH64 312 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 FIBINQ8TAL6 211 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 FAM46AQ96IP4 442 aaKnown RBP12.55□□□□□ -0.4
NFKB1-202ENST00000394820 CNDP2Q96KP4 475 aaKnown RBP12.55□□□□□ -0.4
NFKB1-202ENST00000394820 ZNF226Q9NYT6 803 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 STOX2Q9P2F5 926 aaPredicted RBP12.55□□□□□ -0.4
NFKB1-202ENST00000394820 A0A1W2PRG6 482 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 H7C0S8 307 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 MID1O15344 667 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 POP7O75817 140 aaKnown RBP12.55□□□□□ -0.4
NFKB1-202ENST00000394820 GYPBP06028 91 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 BMP7P18075 431 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 PSMB5P28074 263 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 ERVFC1P60507 584 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 OC90Q02509 493 aaPredicted RBP12.55□□□□□ -0.4
NFKB1-202ENST00000394820 MZT2AQ6P582 158 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 C9orf43Q8TAL5 461 aaPredicted RBP12.55□□□□□ -0.4
NFKB1-202ENST00000394820 DHRS1Q96LJ7 313 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 FERD3LQ96RJ6 166 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 ADAP2Q9NPF8 381 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 ADAM30Q9UKF2 790 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 ENTPD4Q9Y227 616 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 ENPP4Q9Y6X5 453 aa12.55□□□□□ -0.4
NFKB1-202ENST00000394820 A0A075B6Q4 140 aa12.54□□□□□ -0.4
NFKB1-202ENST00000394820 HRO43593 1189 aa12.54□□□□□ -0.4
NFKB1-202ENST00000394820 KLK8O60259 260 aa12.54□□□□□ -0.4
NFKB1-202ENST00000394820 NTN1O95631 604 aa12.54□□□□□ -0.4
NFKB1-202ENST00000394820 PAHP00439 452 aa12.54□□□□□ -0.4
NFKB1-202ENST00000394820 PTGS2P35354 604 aa12.54□□□□□ -0.4
NFKB1-202ENST00000394820 PXDC1Q5TGL8 231 aa12.54□□□□□ -0.4
NFKB1-202ENST00000394820 RASSF6Q6ZTQ3 369 aa12.54□□□□□ -0.4
NFKB1-202ENST00000394820 KRT78Q8N1N4 520 aa12.54□□□□□ -0.4
NFKB1-202ENST00000394820 OR8K3Q8NH51 312 aa12.54□□□□□ -0.4
NFKB1-202ENST00000394820 MAPKAP1Q9BPZ7 522 aa12.54□□□□□ -0.4
NFKB1-202ENST00000394820 MED20Q9H944 212 aa12.54□□□□□ -0.4
NFKB1-202ENST00000394820 TDP1Q9NUW8 608 aa12.54□□□□□ -0.4
NFKB1-202ENST00000394820 WSB2Q9NYS7 404 aaPredicted RBP12.54□□□□□ -0.4
NFKB1-202ENST00000394820 ZNF639Q9UID6 485 aa12.54□□□□□ -0.4
NFKB1-202ENST00000394820 MGAT4AQ9UM21 535 aa12.54□□□□□ -0.4
NFKB1-202ENST00000394820 WASH3PC4AMC7 463 aa12.54□□□□□ -0.4
NFKB1-202ENST00000394820 CAPN5O15484 640 aaPredicted RBP12.54□□□□□ -0.4
NFKB1-202ENST00000394820 HRGP04196 525 aa12.54□□□□□ -0.4
NFKB1-202ENST00000394820 KCNJ10P78508 379 aa12.54□□□□□ -0.4
NFKB1-202ENST00000394820 IFITM2Q01629 132 aa12.54□□□□□ -0.4
NFKB1-202ENST00000394820 P2RY14Q15391 338 aa12.54□□□□□ -0.4
NFKB1-202ENST00000394820 ZNF750Q32MQ0 723 aa12.54□□□□□ -0.4
NFKB1-202ENST00000394820 ANKRD54Q6NXT1 300 aa12.54□□□□□ -0.4
NFKB1-202ENST00000394820 MTSS1LQ765P7 747 aa12.54□□□□□ -0.4
NFKB1-202ENST00000394820 HDDC2Q7Z4H3 204 aa12.54□□□□□ -0.4
NFKB1-202ENST00000394820 OXR1Q8N573 874 aa12.54□□□□□ -0.4
NFKB1-202ENST00000394820 GRHL3Q8TE85 626 aa12.54□□□□□ -0.4
NFKB1-202ENST00000394820 TRMT2BQ96GJ1 504 aaKnown RBP12.54□□□□□ -0.4
NFKB1-202ENST00000394820 SAMD11Q96NU1 681 aa12.54□□□□□ -0.4
NFKB1-202ENST00000394820 NCKAP1Q9Y2A7 1128 aa12.54□□□□□ -0.4
NFKB1-202ENST00000394820 ALG5Q9Y673 324 aa12.54□□□□□ -0.4
NFKB1-202ENST00000394820 ZNF860A6NHJ4 632 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 PCCBP05166 539 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 CD9P21926 228 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 KELP23276 732 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 GRPRP30550 384 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 EVI2BP34910 448 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 TGFBR2P37173 567 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 HNMTP50135 292 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 METAP1P53582 386 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 CXCR4P61073 352 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 WDR5P61964 334 aaKnown RBP12.53□□□□□ -0.4
NFKB1-202ENST00000394820 LARS2Q15031 903 aaKnown RBP12.53□□□□□ -0.4
NFKB1-202ENST00000394820 ARHGAP15Q53QZ3 475 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 TRIM46Q7Z4K8 759 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 DENND6BQ8NEG7 585 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 IL17RDQ8NFM7 739 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms