RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 ZNF615Q8N8J6 731 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 TMEM178AQ8NBL3 297 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 ST6GALNAC3Q8NDV1 305 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 PSD4Q8NDX1 1056 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 OR52R1Q8NGF1 315 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 OR5L2Q8NGL0 311 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 OR6Y1Q8NGX8 325 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 OR8K3Q8NH51 312 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 PPP1R14CQ8TAE6 165 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 NUDT8Q8WV74 236 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 KAT2AQ92830 837 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 TMEM125Q96AQ2 219 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 PGM2Q96G03 612 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 ART5Q96L15 291 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 PPP1R36Q96LQ0 422 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 C3orf30Q96M34 536 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 ZNF681Q96N22 645 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 TSSK3Q96PN8 268 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 PAIP2Q9BPZ3 127 aaKnown RBP7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 PELOQ9BRX2 385 aaKnown RBP7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 TRMOQ9BU70 441 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 ITPAQ9BY32 194 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 C20orf27Q9GZN8 174 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 OR10A5Q9H207 317 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 TRIM45Q9H8W5 580 aaPredicted RBP7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 LRTM1Q9HBL6 345 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 MAT2BQ9NZL9 334 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 BCAP29Q9UHQ4 241 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 BAIAP2L1Q9UHR4 511 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 SH3BGRL2Q9UJC5 107 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 NPIPA1Q9UND3 350 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 OSGIN2Q9Y236 505 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 ZNF780BQ9Y6R6 833 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 SHANK1Q9Y566 2161 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 UTP20O75691 2785 aaKnown RBP7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 C2orf92A0A1B0GVN3 265 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 TMEM120BA0PK00 339 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 CLEC18AA5D8T8 446 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 ASPDHA6ND91 283 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 FAM166BA8MTA8 275 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 H3BQF6 201 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 SLC28A1O00337 649 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 LSM1O15116 133 aaKnown RBP7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 PEX1O43933 1283 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 HS6ST1O60243 411 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 PEX11AO75192 247 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 AGFG2O95081 481 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 HSPA4LO95757 839 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 CHEK2O96017 543 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 CRYABP02511 175 aaKnown RBP7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 ATP1B1P05026 303 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 SERPINE1P05121 402 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 MYZAPP0CAP1 466 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 DHRS4L1P0CG22 281 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 ZNF24P17028 368 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 SDC1P18827 310 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 DDCP20711 480 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 EFNA1P20827 205 aaPredicted RBP7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 GPX3P22352 226 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 GALNSP34059 522 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 PIGAP37287 484 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 DNASE1L1P49184 302 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 WDR4P57081 412 aaKnown RBP7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 FBXW4P57775 412 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 MAGOHP61326 146 aaKnown RBP7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 ALDH6A1Q02252 535 aaKnown RBP7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 FUT7Q11130 342 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 BIKQ13323 160 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 UBAP2LQ14157 1087 aaKnown RBP7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 CASP8Q14790 479 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 HEPACAMQ14CZ8 416 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 PDCD2Q16342 344 aaPredicted RBP7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 MPEG1Q2M385 716 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 ZNF628Q5EBL2 1059 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 PIGGQ5H8A4 983 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 FHL5Q5TD97 284 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 C6orf163Q5TEZ5 329 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 PRAMEF20Q5VT98 475 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 C1QL3Q5VWW1 255 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 BICRALQ6AI39 1079 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 CLEC18BQ6UXF7 455 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 GFRALQ6UXV0 394 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 SIAH3Q8IW03 269 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 CLYBLQ8N0X4 340 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 LRRC25Q8N386 305 aaPredicted RBP7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 FAM26EQ8N5C1 309 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 HORMAD2Q8N7B1 307 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 ZNF781Q8N8C0 355 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 ZNF441Q8N8Z8 693 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 CLEC18CQ8NCF0 446 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 FAM13CQ8NE31 585 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 OR10G3Q8NGC4 313 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 C16orf52Q8NHV5 167 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 NUBPLQ8TB37 319 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 CIDECQ96AQ7 238 aaPredicted RBP7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 ARL8AQ96BM9 186 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 MAGED4Q96JG8 741 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 C1orf50Q9BV19 199 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 TMBIM4Q9HC24 238 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms