RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 EPHA6Q9UF33 1036 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 DAPK2Q9UIK4 370 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 ZNF229Q9UJW7 825 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 ZNF346Q9UL40 294 aaKnown RBP3.32□□□□□ -1.88
XRN1-202ENST00000392981 IRAK3Q9Y616 596 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 A0A1B0GTL3 188 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 C1QTNF9BB2RNN3 333 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 SMLR1H3BR10 107 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 SULT1C2O00338 296 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 KLK8O60259 260 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 EFEMP2O95967 443 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 ALDH3A1P30838 453 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 TAS2R38P59533 333 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 PSG6Q00889 435 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 SCRN3Q0VDG4 424 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 ZNF268Q14587 947 aaPredicted RBP3.32□□□□□ -1.88
XRN1-202ENST00000392981 SF3B4Q15427 424 aaKnown RBP eCLIP3.32□□□□□ -1.884e-7■■□□□ 13.7
XRN1-202ENST00000392981 TRIM65Q6PJ69 517 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 Q6ZNB5 142 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 PAGE2Q7Z2X7 111 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 B3GNT8Q7Z7M8 397 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 TRAM1L1Q8N609 369 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 FBXO36Q8NEA4 188 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 LHX4Q969G2 390 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 TMEM143Q96AN5 459 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 C8orf76Q96K31 380 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 GUCD1Q96NT3 240 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 SNX18Q96RF0 628 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 CCT8L2Q96SF2 557 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 FAM110AQ9BQ89 295 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 UTP23Q9BRU9 249 aaKnown RBP3.32□□□□□ -1.88
XRN1-202ENST00000392981 SLITRK6Q9H5Y7 841 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 MRC2Q9UBG0 1479 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 A0A1W2PR77 199 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 GXYLT2A0PJZ3 443 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 ZAR1LA6NP61 321 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 HAS3O00219 553 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 POLR1CO15160 346 aaPredicted RBP3.32□□□□□ -1.88
XRN1-202ENST00000392981 HPXP02790 462 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 P04436 131 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 RFPL3SP0C7P2 107 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 ACP2P11117 423 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 IL12BP29460 328 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 HNRNPMP52272 730 aaKnown RBP eCLIP3.32□□□□□ -1.88
XRN1-202ENST00000392981 KDSRQ06136 332 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 ZNF415Q09FC8 603 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 ODF4Q2M2E3 257 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 ASPHD1Q5U4P2 390 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 ZNF425Q6IV72 752 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 SLC39A4Q6P5W5 647 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 SETD3Q86TU7 594 aaPredicted RBP3.32□□□□□ -1.88
XRN1-202ENST00000392981 INO80EQ8NBZ0 244 aaPredicted RBP3.32□□□□□ -1.88
XRN1-202ENST00000392981 SLC38A4Q969I6 547 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 SLC25A28Q96A46 364 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 CTHRC1Q96CG8 243 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 CCDC126Q96EE4 140 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 MRPL53Q96EL3 112 aaKnown RBP3.32□□□□□ -1.88
XRN1-202ENST00000392981 TXNDC15Q96J42 360 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 TSSK2Q96PF2 358 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 IL22Q9GZX6 179 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 PCMTD2Q9NV79 361 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 ENPP5Q9UJA9 477 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 C3orf18Q9UK00 162 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 LRP12Q9Y561 859 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 V9GYQ6 96 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 NME2P1O60361 137 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 SLC19A2O60779 497 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 CCNB2O95067 398 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 CLTAP09496 248 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 RNH1P13489 461 aaKnown RBP3.32□□□□□ -1.88
XRN1-202ENST00000392981 GNA11P29992 359 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 OXTRP30559 389 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 MATKP42679 507 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 TUFMP49411 452 aaKnown RBP3.32□□□□□ -1.88
XRN1-202ENST00000392981 CHI3L2Q15782 390 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 SAMD4BQ5PRF9 694 aaKnown RBP3.32□□□□□ -1.88
XRN1-202ENST00000392981 OR52W1Q6IF63 320 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 PLXDC2Q6UX71 529 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 RAD9BQ6WBX8 426 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 DEF8Q6ZN54 512 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 CPEB3Q8NE35 698 aaKnown RBP3.32□□□□□ -1.88
XRN1-202ENST00000392981 TCP10LQ8TDR4 215 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 HCAR2Q8TDS4 363 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 SLC25A43Q8WUT9 341 aaPredicted RBP3.32□□□□□ -1.88
XRN1-202ENST00000392981 ELMO1Q92556 727 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 ABTB1Q969K4 478 aaPredicted RBP3.32□□□□□ -1.88
XRN1-202ENST00000392981 C10orf35Q96D05 121 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 GPA33Q99795 319 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 MACROD1Q9BQ69 325 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 GPR173Q9NS66 373 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 NDE1Q9NXR1 346 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 TAS2R16Q9NYV7 291 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 EIF3AQ14152 1382 aaKnown RBP3.31□□□□□ -1.88
XRN1-202ENST00000392981 PTPRCP08575 1304 aa3.31□□□□□ -1.88
XRN1-202ENST00000392981 LOC390937A0A1W2PQ73 354 aa3.31□□□□□ -1.88
XRN1-202ENST00000392981 NR5A2O00482 541 aa3.31□□□□□ -1.88
XRN1-202ENST00000392981 PDXKO00764 312 aa3.31□□□□□ -1.88
XRN1-202ENST00000392981 HSPB6O14558 160 aa3.31□□□□□ -1.88
XRN1-202ENST00000392981 NDUFB4O95168 129 aa3.31□□□□□ -1.88
XRN1-202ENST00000392981 RAB3DO95716 219 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms