RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 FAM111BQ6SJ93 734 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 ALDH16A1Q8IZ83 802 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 CARFQ8N187 725 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 NUP43Q8NFH3 380 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 SLC38A5Q8WUX1 472 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 XAGE5Q8WWM1 108 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 COQ10BQ9H8M1 238 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 FGF21Q9NSA1 209 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 OLAHQ9NV23 265 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 TMEM229AB2RXF0 380 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 TGFBR3LH3BV60 316 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 UPK1AO00322 258 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 KHNYNO15037 678 aaKnown RBP11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 EMC8O43402 210 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 GPR75O95800 540 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 FHP07954 510 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 CKMT1AP12532 417 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 BMP2P12643 396 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 RNH1P13489 461 aaKnown RBP11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 AVPR1BP47901 424 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 BTG2P78543 158 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 PDK3Q15120 406 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 MAPK11Q15759 364 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 TRMT12Q53H54 448 aaKnown RBP11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 CYBRD1Q53TN4 286 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 GARNL3Q5VVW2 1013 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 FOXB2Q5VYV0 432 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 TMEM64Q6YI46 380 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 DGAT2L6Q6ZPD8 337 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 CBLL1Q75N03 491 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 HSH2DQ96JZ2 352 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 SLC29A1Q99808 456 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 DNAAF2Q9NVR5 837 aaKnown RBP11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 SAMD4AQ9UPU9 718 aaKnown RBP11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 KCNE3Q9Y6H6 103 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 KIF26BQ2KJY2 2108 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 IGHV5-10-1A0A0J9YXX1 117 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 SMIM31A0A1B0GVY4 71 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 LNP1A1A4G5 178 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 M0QX08 132 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 ZNF749O43361 778 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 HYAL3O43820 417 aaPredicted RBP11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 RBBP4Q09028 425 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 PPP1R8Q12972 351 aaKnown RBP11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 SLC13A2Q13183 592 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 MYBPC3Q14896 1274 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 ATP6AP1Q15904 470 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 SYPL1Q16563 259 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 ZNF630Q2M218 657 aaPredicted RBP11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 CNPY1Q3B7I2 92 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 INAVAQ3KP66 663 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 LIN52Q52LA3 116 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 FKBP9P1Q75LS8 142 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 EPHX4Q8IUS5 362 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 TMEM126BQ8IUX1 230 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 SMYD1Q8NB12 490 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 OR51Q1Q8NH59 317 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 SFXN5Q8TD22 340 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 TANKQ92844 425 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 NAT6Q93015 286 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 TAMM41Q96BW9 452 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 CENPNQ96H22 339 aaPredicted RBP11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 TMEM19Q96HH6 336 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 VPS50Q96JG6 964 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 YIPF2Q9BWQ6 316 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 DDX18Q9NVP1 670 aaKnown RBP11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 SOCS2O14508 198 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 CLOCKO15516 846 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 DIRAS1O95057 198 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 LDLRP01130 860 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 CAPNS1P04632 268 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 TFPTP0C1Z6 253 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 CT62P0C5K7 136 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 PABPC4LP0CB38 370 aaKnown RBP11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 TNFRSF1BP20333 461 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 NT5EP21589 574 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 XCR1P46094 333 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 IST1P53990 364 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 ITGA1P56199 1179 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 PRR5P85299 388 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 C1orf189Q5VU69 101 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 EIF3MQ7L2H7 374 aaKnown RBP11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 HMGN2P46Q86SG4 172 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 GPR135Q8IZ08 494 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 EID3Q8N140 333 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 OR56A1Q8NGH5 318 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 ZNF501Q96CX3 271 aaPredicted RBP11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 GIMAP5Q96F15 307 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 CCDC74BQ96LY2 380 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 CNBD2Q96M20 576 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 NTN4Q9HB63 628 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 C3orf14Q9HBI5 128 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 UBAP1Q9NZ09 502 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 RPS6KA6Q9UK32 745 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 RAB23Q9ULC3 237 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 OAZ3Q9UMX2 235 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 AP4B1Q9Y6B7 739 aa11.43□□□□□ -0.58
SPTBN1-203ENST00000389980 C5orf58C9J3I9 102 aa11.42□□□□□ -0.58
SPTBN1-203ENST00000389980 hCG_2039718K7EN88 272 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms