RNA–Protein interactions for RNA: ENST00000385297.1

MIR548A3-201, Transcript of microRNA 548a-3, humanhuman

BASIC

Gene MIR548A3, Length 97 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548A3-201ENST00000385297 ZNF430Q9H8G1 570 aaPredicted RBP-0.35□□□□□ -2.47
MIR548A3-201ENST00000385297 JMJD4Q9H9V9 463 aa-0.35□□□□□ -2.47
MIR548A3-201ENST00000385297 S100A14Q9HCY8 104 aa-0.35□□□□□ -2.47
MIR548A3-201ENST00000385297 ESM1Q9NQ30 184 aa-0.35□□□□□ -2.47
MIR548A3-201ENST00000385297 GDE1Q9NZC3 331 aa-0.35□□□□□ -2.47
MIR548A3-201ENST00000385297 SEC14L4Q9UDX3 406 aa-0.35□□□□□ -2.47
MIR548A3-201ENST00000385297 NOL12Q9UGY1 213 aaKnown RBP eCLIP-0.35□□□□□ -2.47
MIR548A3-201ENST00000385297 SLC24A2Q9UI40 661 aa-0.35□□□□□ -2.47
MIR548A3-201ENST00000385297 HEG1Q9ULI3 1381 aa-0.35□□□□□ -2.47
MIR548A3-201ENST00000385297 MACF1Q9UPN3 7388 aaKnown RBP-0.35□□□□□ -2.47
MIR548A3-201ENST00000385297 CLDN4O14493 209 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 B4GAT1O43505 415 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 RTN3O95197 1032 aaPredicted RBP-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 CTDNEP1O95476 244 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 NUDT14O95848 222 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 PGK1P00558 417 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 EPORP19235 508 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 UQCRC2P22695 453 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 KRTAP10-4P60372 401 aaPredicted RBP-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 RPL27P61353 136 aaKnown RBP-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 MAP2K1Q02750 393 aaPredicted RBP-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 IL10RBQ08334 325 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 GPR50Q13585 617 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 BAATQ14032 418 aaPredicted RBP-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 CD226Q15762 336 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 CDKN3Q16667 212 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 C15orf59Q2T9L4 293 aaPredicted RBP-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 HSP90AB2PQ58FF8 381 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 RAB41Q5JT25 222 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 NCR3LG1Q68D85 454 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 HCP5Q6MZN7 132 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 C9orf40Q8IXQ3 194 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 MCUQ8NE86 351 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 OR6J1Q8NGC5 347 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 OR13C5Q8NGS8 318 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 UBTD2Q8WUN7 234 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 ANKRD49Q8WVL7 239 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 USP6NLQ92738 828 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 NEIL2Q969S2 332 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 ZNF622Q969S3 477 aaKnown RBP eCLIP-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 OTUB1Q96FW1 271 aaPredicted RBP-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 CEP170P1Q96L14 293 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 FAM173AQ9BQD7 235 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 HCAR1Q9BXC0 346 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 EML4Q9HC35 981 aaKnown RBP-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 RRN3Q9NYV6 651 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 TAS2R16Q9NYV7 291 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 WDR35Q9P2L0 1181 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 ONECUT1Q9UBC0 465 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 SLC2A6Q9UGQ3 507 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 PRPF19Q9UMS4 504 aaKnown RBP-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 NCKAP1Q9Y2A7 1128 aa-0.36□□□□□ -2.47
MIR548A3-201ENST00000385297 COL22A1Q8NFW1 1626 aaPredicted RBP-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 SEC16AO15027 2179 aa-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 TMEM150CB9EJG8 249 aa-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 NPIPA3F8WFD2 350 aa-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 GDI1P31150 447 aa-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 UGT1A5P35504 534 aa-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 MATR3P43243 847 aaKnown RBP eCLIP-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 MAGEB1P43366 347 aa-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 CRKLP46109 303 aaKnown RBP-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 MRPL12P52815 198 aaKnown RBP-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 LIMK1P53667 647 aa-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 NOP14P78316 857 aaKnown RBP-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 ZIC1Q15915 447 aa-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 SYPL1Q16563 259 aa-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 SHROOM1Q2M3G4 852 aaPredicted RBP-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 SEL1L2Q5TEA6 688 aa-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 CXCL17Q6UXB2 119 aa-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 SHISA6Q6ZSJ9 500 aa-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 FRA10AC1Q70Z53 315 aa-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 SLFN11Q7Z7L1 901 aa-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 C12orf56Q8IXR9 622 aa-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 FTMTQ8N4E7 242 aa-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 C1orf131Q8NDD1 294 aaKnown RBP-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 CHDHQ8NE62 594 aaPredicted RBP-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 TRAF3IP1Q8TDR0 691 aaPredicted RBP-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 BPIFA2Q96DR5 249 aa-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 TSSK1BQ9BXA7 367 aa-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 FUT8Q9BYC5 575 aa-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 NOL11Q9H8H0 719 aaKnown RBP-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 VIPAS39Q9H9C1 493 aa-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 ADGRL4Q9HBW9 690 aa-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 TBC1D7Q9P0N9 293 aa-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 SUCLA2Q9P2R7 463 aaPredicted RBP-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 EIF3KQ9UBQ5 218 aaKnown RBP-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 DDX25Q9UHL0 483 aaKnown RBP-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 FZR1Q9UM11 496 aa-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 DUSP12Q9UNI6 340 aa-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 SMC3Q9UQE7 1217 aa-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 ITM2BQ9Y287 266 aa-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 RPH3AQ9Y2J0 694 aaPredicted RBP-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 TDRD9Q8NDG6 1382 aaKnown RBP-0.37□□□□□ -2.47
MIR548A3-201ENST00000385297 ZSWIM8A7E2V4 1837 aa-0.38□□□□□ -2.47
MIR548A3-201ENST00000385297 FAM149AA5PLN7 773 aa-0.38□□□□□ -2.47
MIR548A3-201ENST00000385297 C11orf94C9JXX5 98 aa-0.38□□□□□ -2.47
MIR548A3-201ENST00000385297 CTDSP2O14595 271 aa-0.38□□□□□ -2.47
MIR548A3-201ENST00000385297 LCMT2O60294 686 aaKnown RBP-0.38□□□□□ -2.47
MIR548A3-201ENST00000385297 LYNP07948 512 aa-0.38□□□□□ -2.47
MIR548A3-201ENST00000385297 H2AFZP0C0S5 128 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms