RNA–Protein interactions for RNA: ENST00000384526.1

RNU6-880P-201, Transcript of RNA, U6 small nuclear 880, pseudogene, humanhuman

BASIC

Gene RNU6-880P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-880P-201ENST00000384526 RBMY1FQ15415 496 aaKnown RBP-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 TSTQ16762 297 aaKnown RBP-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 SHROOM1Q2M3G4 852 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 UNC50Q53HI1 259 aa-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 PLPP4Q5VZY2 271 aa-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 C17orf107Q6ZR85 190 aa-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 RNF165Q6ZSG1 346 aa-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 ELMOD1Q8N336 334 aa-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 KCTD6Q8NC69 237 aa-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 SCFD2Q8WU76 684 aa-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 KRT35Q92764 455 aa-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 LRRC58Q96CX6 371 aa-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 PDXPQ96GD0 296 aa-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 CCDC34Q96HJ3 373 aa-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 GDAP1L1Q96MZ0 367 aa-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 MUS81Q96NY9 551 aa-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 SMIM14Q96QK8 99 aa-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 ALKBH7Q9BT30 221 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 DPEP2Q9H4A9 486 aa-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 C5orf66Q9H5L9 145 aa-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 ZNF430Q9H8G1 570 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 TBC1D22BQ9NU19 505 aa-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 MED17Q9NVC6 651 aa-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 IRAK4Q9NWZ3 460 aa-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 MARCH5Q9NX47 278 aa-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 PSD3Q9NYI0 1048 aa-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 TAS2R16Q9NYV7 291 aa-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 TP53TG5Q9Y2B4 290 aa-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 FAM208BQ5VWN6 2430 aa-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 KAT6BQ8WYB5 2073 aa-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 CHD9Q3L8U1 2897 aa-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 LRRK2Q5S007 2527 aa-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 ITPR3Q14573 2671 aa-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 GCN1Q92616 2671 aaKnown RBP-0.41□□□□□ -2.48
RNU6-880P-201ENST00000384526 STARD9Q9P2P6 4700 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 OR2A25A4D2G3 310 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 OVOL1O14753 267 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 PLIN1O60240 522 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 SPAG7O75391 227 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 BBOX1O75936 387 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 SLC25A27O95847 323 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 GOT2P00505 430 aaKnown RBP-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 PENKP01210 267 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 HSPA1AP0DMV8 641 aaKnown RBP-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 HSPA1BP0DMV9 641 aaKnown RBP-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 TM4SF1P30408 202 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 HSPA4P34932 840 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 CSNK1DP48730 415 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 FHITP49789 147 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 ASCL1P50553 236 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 PRPF4BQ13523 1007 aaKnown RBP-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 BECN1Q14457 450 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 IRF3Q14653 427 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 KCTD2Q14681 263 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 LACTB2Q53H82 288 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 CMPK2Q5EBM0 449 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 MS4A13Q5J8X5 152 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 NCR3LG1Q68D85 454 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 FUT10Q6P4F1 479 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 PRSS48Q7RTY5 328 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 ESX1Q8N693 406 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 ALLCQ8N6M5 410 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 DUSP18Q8NEJ0 188 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 OR6J1Q8NGC5 347 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 OR4F5Q8NH21 305 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 GPR148Q8TDV2 347 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 TAF4BQ92750 862 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 SLC35C1Q96A29 364 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 TVP23CQ96ET8 276 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 CCDC136Q96JN2 1154 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 PSMD1Q99460 953 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 FEVQ99581 238 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 FAM173AQ9BQD7 235 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 PELOQ9BRX2 385 aaKnown RBP-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 APOL6Q9BWW8 343 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 FTOQ9C0B1 505 aaKnown RBP eCLIP-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 RPF1Q9H9Y2 349 aaKnown RBP-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 ADGRL4Q9HBW9 690 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 WASH6PQ9NQA3 447 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 FZR1Q9UM11 496 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 DUSP12Q9UNI6 340 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 LRP4O75096 1905 aa-0.42□□□□□ -2.48
RNU6-880P-201ENST00000384526 WDR87Q6ZQQ6 2873 aa-0.43□□□□□ -2.48
RNU6-880P-201ENST00000384526 PRRC2CQ9Y520 2896 aaKnown RBP-0.43□□□□□ -2.48
RNU6-880P-201ENST00000384526 CEP295Q9C0D2 2601 aa-0.43□□□□□ -2.48
RNU6-880P-201ENST00000384526 A0A0J9YXY3 114 aa-0.43□□□□□ -2.48
RNU6-880P-201ENST00000384526 PGRMC2O15173 223 aa-0.43□□□□□ -2.48
RNU6-880P-201ENST00000384526 AP5Z1O43299 807 aa-0.43□□□□□ -2.48
RNU6-880P-201ENST00000384526 CSDE1O75534 798 aaKnown RBP-0.43□□□□□ -2.48
RNU6-880P-201ENST00000384526 LYPLA1O75608 230 aaPredicted RBP-0.43□□□□□ -2.48
RNU6-880P-201ENST00000384526 RNASEH2AO75792 299 aaKnown RBP-0.43□□□□□ -2.48
RNU6-880P-201ENST00000384526 CTDNEP1O95476 244 aa-0.43□□□□□ -2.48
RNU6-880P-201ENST00000384526 LINGO3P0C6S8 592 aa-0.43□□□□□ -2.48
RNU6-880P-201ENST00000384526 CISD3P0C7P0 127 aa-0.43□□□□□ -2.48
RNU6-880P-201ENST00000384526 PFKFB1P16118 471 aa-0.43□□□□□ -2.48
RNU6-880P-201ENST00000384526 UQCRC2P22695 453 aa-0.43□□□□□ -2.48
RNU6-880P-201ENST00000384526 NPY1RP25929 384 aa-0.43□□□□□ -2.48
RNU6-880P-201ENST00000384526 CALML3P27482 149 aa-0.43□□□□□ -2.48
RNU6-880P-201ENST00000384526 HOXD10P28358 340 aa-0.43□□□□□ -2.48
RNU6-880P-201ENST00000384526 SLC1A3P43003 542 aa-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms