RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 PGAM2P15259 253 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 GSK3BP49841 420 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 CRISP1P54107 249 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 IKZF1Q13422 519 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 ZNF460Q14592 562 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 MFSD13AQ14CX5 517 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 DPY19L1Q2PZI1 675 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 TMEM196Q5HYL7 178 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 AAED1Q7RTV5 226 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 UMODL1-AS1Q8N2C9 162 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 ACMSDQ8TDX5 336 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 PLA2G3Q9NZ20 509 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 FADS2P1A8MWK0 482 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 RNF225M0QZC1 329 aaPredicted RBP8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 ABCD4O14678 606 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 CEACAM1P13688 526 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 PRDX3P30048 256 aaKnown RBP8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 OR3A3P47888 321 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 OR3A2P47893 321 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 SLC14A1Q13336 389 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 OR7A5Q15622 319 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 KCNJ8Q15842 424 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 MAMDC2Q7Z304 686 aaPredicted RBP8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 C3orf58Q8NDZ4 430 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 OR6Y1Q8NGX8 325 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 OR52J3Q8NH60 311 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 SLC37A2Q8TED4 501 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 PLA2G2FQ9BZM2 168 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 PRMT8Q9NR22 394 aaPredicted RBP8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 TEX10Q9NXF1 929 aaPredicted RBP8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 LOC102725191A0A1B0GVB3 256 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 NPIPB15A6NHN6 443 aaPredicted RBP8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 G3V2T6 193 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 PROM1O43490 865 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 TSC22D2O75157 780 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 ALDOBP05062 364 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 CD53P19397 219 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 PIK3CBP42338 1070 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 GDF5P43026 501 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 FABP6P51161 128 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 ZSWIM7Q19AV6 140 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 NDUFAF7Q7L592 441 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 GALNT10Q86SR1 603 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 BPIFB2Q8N4F0 458 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 FRMD1Q8N878 549 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 OR5T2Q8NGG2 359 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 OR2L2Q8NH16 312 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 HMG20AQ9NP66 347 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 ERRFI1Q9UJM3 462 aaPredicted RBP8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 ZNF180Q9UJW8 692 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 RAP2CQ9Y3L5 183 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 EFCAB10A6NFE3 127 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 FAM25EA8MYX2 175 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 K7EQS6 105 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 M0QZ24 198 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 DSCR3O14972 297 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 GALR3O60755 368 aaPredicted RBP8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 RPP14O95059 124 aaKnown RBP8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 RCBTB2O95199 551 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 C2P06681 752 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 PRPS1L1P21108 318 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 HSD3B2P26439 372 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 RFC3P40938 356 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 RFX4Q33E94 735 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 LIN52Q52LA3 116 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 PLEKHO2Q8TD55 490 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 SENP5Q96HI0 755 aaPredicted RBP8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 LHPPQ9H008 270 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 FAM118AQ9NWS6 357 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 COMMD9Q9P000 198 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 A0A1B0GUH1 482 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 ZNF670-ZNF695F2Z2N8 137 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 PPIHO43447 177 aaKnown RBP8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 CHST10O43529 356 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 CTGFP29279 349 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 POU3F4P49335 361 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 IRAK1P51617 712 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 PCBD1P61457 104 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 MAD2L1BPQ15013 274 aaPredicted RBP8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 OR1C1Q15619 314 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 OR2A2Q6IF42 318 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 LIN54Q6MZP7 749 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 LAPTM4BQ86VI4 370 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 C11orf40Q8WZ69 217 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 WDR24Q96S15 920 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 OSBPL11Q9BXB4 747 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 PELI2Q9HAT8 420 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 ABRACLQ9P1F3 81 aa8.73□□□□□ -1.01
LIMCH1-202ENST00000381753 IGHV1OR15-9A0A0B4J2B8 117 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 OR1I1O60431 355 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 SMPD2O60906 423 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 BCKDHBP21953 392 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 SLC6A4P31645 630 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 GPR143P51810 404 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 DCAF7P61962 342 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 FASTKD3Q14CZ7 662 aaKnown RBP8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 CRELD2Q6UXH1 353 aaPredicted RBP8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 TECPR1Q7Z6L1 1165 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 CREG2Q8IUH2 290 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 OR2T12Q8NG77 320 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms