RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 TEX35Q5T0J7 233 aa12.99□□□□□ -0.33
SHOX-202ENST00000381575 CCNYL2Q5T2Q4 361 aa12.99□□□□□ -0.33
SHOX-202ENST00000381575 HLA-DQA1Q5Y7H0 255 aa12.99□□□□□ -0.33
SHOX-202ENST00000381575 COMMD6Q7Z4G1 85 aa12.99□□□□□ -0.33
SHOX-202ENST00000381575 WDR53Q7Z5U6 358 aaPredicted RBP12.99□□□□□ -0.33
SHOX-202ENST00000381575 MILR1Q7Z6M3 343 aa12.99□□□□□ -0.33
SHOX-202ENST00000381575 TMEM200AQ86VY9 491 aa12.99□□□□□ -0.33
SHOX-202ENST00000381575 TAGAPQ8N103 731 aa12.99□□□□□ -0.33
SHOX-202ENST00000381575 LRRC25Q8N386 305 aaPredicted RBP12.99□□□□□ -0.33
SHOX-202ENST00000381575 SIMC1Q8NDZ2 872 aa12.99□□□□□ -0.33
SHOX-202ENST00000381575 OR4K14Q8NGD5 310 aa12.99□□□□□ -0.33
SHOX-202ENST00000381575 ZNF597Q96LX8 424 aa12.99□□□□□ -0.33
SHOX-202ENST00000381575 RILPQ96NA2 401 aa12.99□□□□□ -0.33
SHOX-202ENST00000381575 FMO2Q99518 471 aa12.99□□□□□ -0.33
SHOX-202ENST00000381575 NTMT1Q9BV86 223 aa12.99□□□□□ -0.33
SHOX-202ENST00000381575 OR10A5Q9H207 317 aa12.99□□□□□ -0.33
SHOX-202ENST00000381575 ELOVL6Q9H5J4 265 aa12.99□□□□□ -0.33
SHOX-202ENST00000381575 CNIH4Q9P003 139 aa12.99□□□□□ -0.33
SHOX-202ENST00000381575 IKBKGQ9Y6K9 419 aa12.99□□□□□ -0.33
SHOX-202ENST00000381575 NF1P21359 2839 aa12.99□□□□□ -0.33
SHOX-202ENST00000381575 PRRC2AP48634 2157 aaKnown RBP12.99□□□□□ -0.33
SHOX-202ENST00000381575 MED12LQ86YW9 2145 aa12.99□□□□□ -0.33
SHOX-202ENST00000381575 C15orf38-AP3S2A0A0A6YYH1 394 aa12.98□□□□□ -0.33
SHOX-202ENST00000381575 A8MT66 165 aa12.98□□□□□ -0.33
SHOX-202ENST00000381575 HCN1O60741 890 aa12.98□□□□□ -0.33
SHOX-202ENST00000381575 WDR1O75083 606 aa12.98□□□□□ -0.33
SHOX-202ENST00000381575 TRIM3O75382 744 aaPredicted RBP12.98□□□□□ -0.33
SHOX-202ENST00000381575 TRAPPC6AO75865 159 aa12.98□□□□□ -0.33
SHOX-202ENST00000381575 PDYNP01213 254 aa12.98□□□□□ -0.33
SHOX-202ENST00000381575 SBK3P0C264 359 aa12.98□□□□□ -0.33
SHOX-202ENST00000381575 CPMP14384 443 aa12.98□□□□□ -0.33
SHOX-202ENST00000381575 FEN1P39748 380 aaKnown RBP12.98□□□□□ -0.33
SHOX-202ENST00000381575 MAPK12P53778 367 aa12.98□□□□□ -0.33
SHOX-202ENST00000381575 DLX5P56178 289 aa12.98□□□□□ -0.33
SHOX-202ENST00000381575 RPS6KA2Q15349 733 aa12.98□□□□□ -0.33
SHOX-202ENST00000381575 WHAMMP3Q1A5X7 153 aa12.98□□□□□ -0.33
SHOX-202ENST00000381575 FAM111BQ6SJ93 734 aa12.98□□□□□ -0.33
SHOX-202ENST00000381575 TAOK1Q7L7X3 1001 aa12.98□□□□□ -0.33
SHOX-202ENST00000381575 RELL1Q8IUW5 271 aa12.98□□□□□ -0.33
SHOX-202ENST00000381575 ULK2Q8IYT8 1036 aa12.98□□□□□ -0.33
SHOX-202ENST00000381575 METTL4Q8N3J2 472 aa12.98□□□□□ -0.33
SHOX-202ENST00000381575 LIX1Q8N485 282 aa12.98□□□□□ -0.33
SHOX-202ENST00000381575 MMGT1Q8N4V1 131 aa12.98□□□□□ -0.33
SHOX-202ENST00000381575 ZNF615Q8N8J6 731 aa12.98□□□□□ -0.33
SHOX-202ENST00000381575 C7orf57Q8NEG2 295 aa12.98□□□□□ -0.33
SHOX-202ENST00000381575 ADCY4Q8NFM4 1077 aa12.98□□□□□ -0.33
SHOX-202ENST00000381575 NEIL3Q8TAT5 605 aa12.98□□□□□ -0.33
SHOX-202ENST00000381575 ZNF483Q8TF39 744 aaPredicted RBP12.98□□□□□ -0.33
SHOX-202ENST00000381575 ZNF559Q9BR84 538 aa12.98□□□□□ -0.33
SHOX-202ENST00000381575 FUT8Q9BYC5 575 aa12.98□□□□□ -0.33
SHOX-202ENST00000381575 BRINP2Q9C0B6 783 aa12.98□□□□□ -0.33
SHOX-202ENST00000381575 PSD3Q9NYI0 1048 aa12.98□□□□□ -0.33
SHOX-202ENST00000381575 EHD3Q9NZN3 535 aa12.98□□□□□ -0.33
SHOX-202ENST00000381575 SLC6A5Q9Y345 797 aa12.98□□□□□ -0.33
SHOX-202ENST00000381575 NPFFR2Q9Y5X5 522 aa12.98□□□□□ -0.33
SHOX-202ENST00000381575 ERAL1O75616 437 aaKnown RBP12.97□□□□□ -0.33
SHOX-202ENST00000381575 KRT38O76015 456 aa12.97□□□□□ -0.33
SHOX-202ENST00000381575 OR4F21O95013 312 aa12.97□□□□□ -0.33
SHOX-202ENST00000381575 HOXD4P09016 255 aaPredicted RBP12.97□□□□□ -0.33
SHOX-202ENST00000381575 GALNSP34059 522 aa12.97□□□□□ -0.33
SHOX-202ENST00000381575 SERPINB9P50453 376 aa12.97□□□□□ -0.33
SHOX-202ENST00000381575 GALNT1Q10472 559 aaPredicted RBP12.97□□□□□ -0.33
SHOX-202ENST00000381575 FUT7Q11130 342 aa12.97□□□□□ -0.33
SHOX-202ENST00000381575 DUSP8Q13202 625 aa12.97□□□□□ -0.33
SHOX-202ENST00000381575 LTB4RQ15722 352 aa12.97□□□□□ -0.33
SHOX-202ENST00000381575 TSNAXIP1Q2TAA8 658 aa12.97□□□□□ -0.33
SHOX-202ENST00000381575 C6orf163Q5TEZ5 329 aa12.97□□□□□ -0.33
SHOX-202ENST00000381575 FNDC7Q5VTL7 733 aa12.97□□□□□ -0.33
SHOX-202ENST00000381575 METTL2BQ6P1Q9 378 aaKnown RBP12.97□□□□□ -0.33
SHOX-202ENST00000381575 SEM1Q6ZVN7 128 aa12.97□□□□□ -0.33
SHOX-202ENST00000381575 SPPL2AQ8TCT8 520 aa12.97□□□□□ -0.33
SHOX-202ENST00000381575 TRPC4APQ8TEL6 797 aa12.97□□□□□ -0.33
SHOX-202ENST00000381575 SELENOMQ8WWX9 145 aa12.97□□□□□ -0.33
SHOX-202ENST00000381575 ADIPOR1Q96A54 375 aa12.97□□□□□ -0.33
SHOX-202ENST00000381575 GNRHR2Q96P88 292 aa12.97□□□□□ -0.33
SHOX-202ENST00000381575 MRPL57Q9BQC6 102 aaKnown RBP12.97□□□□□ -0.33
SHOX-202ENST00000381575 NXF5Q9H1B4 397 aaKnown RBP12.97□□□□□ -0.33
SHOX-202ENST00000381575 MRPL46Q9H2W6 279 aaKnown RBP12.97□□□□□ -0.33
SHOX-202ENST00000381575 B4GALT7Q9UBV7 327 aa12.97□□□□□ -0.33
SHOX-202ENST00000381575 ZNF225Q9UK10 706 aa12.97□□□□□ -0.33
SHOX-202ENST00000381575 PCNX3Q9H6A9 2034 aa12.97□□□□□ -0.33
SHOX-202ENST00000381575 C2orf72A6NCS6 295 aa12.96□□□□□ -0.33
SHOX-202ENST00000381575 TP53I11O14683 189 aa12.96□□□□□ -0.33
SHOX-202ENST00000381575 GNB5O14775 395 aa12.96□□□□□ -0.33
SHOX-202ENST00000381575 NME6O75414 186 aaPredicted RBP12.96□□□□□ -0.33
SHOX-202ENST00000381575 PORP16435 677 aaPredicted RBP12.96□□□□□ -0.33
SHOX-202ENST00000381575 CAPN3P20807 821 aa12.96□□□□□ -0.33
SHOX-202ENST00000381575 S1PR1P21453 382 aa12.96□□□□□ -0.33
SHOX-202ENST00000381575 GPX3P22352 226 aa12.96□□□□□ -0.33
SHOX-202ENST00000381575 ABCD3P28288 659 aa12.96□□□□□ -0.33
SHOX-202ENST00000381575 MASP1P48740 699 aa12.96□□□□□ -0.33
SHOX-202ENST00000381575 ALDH9A1P49189 494 aa12.96□□□□□ -0.33
SHOX-202ENST00000381575 TBL3Q12788 808 aaKnown RBP12.96□□□□□ -0.33
SHOX-202ENST00000381575 TOMM20Q15388 145 aa12.96□□□□□ -0.33
SHOX-202ENST00000381575 GGTA1PQ4G0N0 100 aa12.96□□□□□ -0.33
SHOX-202ENST00000381575 EIPR1Q53HC9 387 aa12.96□□□□□ -0.33
SHOX-202ENST00000381575 DCST1Q5T197 706 aa12.96□□□□□ -0.33
SHOX-202ENST00000381575 TMEM198Q66K66 360 aa12.96□□□□□ -0.33
SHOX-202ENST00000381575 PAGE2Q7Z2X7 111 aa12.96□□□□□ -0.33
SHOX-202ENST00000381575 DND1Q8IYX4 353 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms