RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 CLGNO14967 610 aa15.71■□□□□ 0.11
HMGN1-203ENST00000380748 CD5LO43866 347 aa15.71■□□□□ 0.11
HMGN1-203ENST00000380748 OR10H2O60403 315 aa15.71■□□□□ 0.11
HMGN1-203ENST00000380748 BANF1O75531 89 aa15.71■□□□□ 0.11
HMGN1-203ENST00000380748 TMED10P49755 219 aaKnown RBP15.71■□□□□ 0.11
HMGN1-203ENST00000380748 PCDH1Q08174 1060 aa15.71■□□□□ 0.11
HMGN1-203ENST00000380748 SLAMF1Q13291 335 aa15.71■□□□□ 0.11
HMGN1-203ENST00000380748 SETDB1Q15047 1291 aa15.71■□□□□ 0.11
HMGN1-203ENST00000380748 CLEC12BQ2HXU8 276 aa15.71■□□□□ 0.11
HMGN1-203ENST00000380748 AP5B1Q2VPB7 878 aa15.71■□□□□ 0.11
HMGN1-203ENST00000380748 ENPP6Q6UWR7 440 aa15.71■□□□□ 0.11
HMGN1-203ENST00000380748 FRA10AC1Q70Z53 315 aa15.71■□□□□ 0.11
HMGN1-203ENST00000380748 BTLAQ7Z6A9 289 aa15.71■□□□□ 0.11
HMGN1-203ENST00000380748 GALNT7Q86SF2 657 aa15.71■□□□□ 0.11
HMGN1-203ENST00000380748 CNEP1R1Q8N9A8 125 aa15.71■□□□□ 0.11
HMGN1-203ENST00000380748 NAT8LQ8N9F0 302 aa15.71■□□□□ 0.11
HMGN1-203ENST00000380748 OR14L1PQ8NHC6 308 aa15.71■□□□□ 0.11
HMGN1-203ENST00000380748 TANKQ92844 425 aa15.71■□□□□ 0.11
HMGN1-203ENST00000380748 RIT1Q92963 219 aa15.71■□□□□ 0.11
HMGN1-203ENST00000380748 TP53INP1Q96A56 240 aa15.71■□□□□ 0.11
HMGN1-203ENST00000380748 CTHRC1Q96CG8 243 aa15.71■□□□□ 0.11
HMGN1-203ENST00000380748 PTCD3Q96EY7 689 aaKnown RBP15.71■□□□□ 0.11
HMGN1-203ENST00000380748 VPS39Q96JC1 886 aa15.71■□□□□ 0.11
HMGN1-203ENST00000380748 KRT12Q99456 494 aa15.71■□□□□ 0.11
HMGN1-203ENST00000380748 PHACTR1Q9C0D0 580 aa15.71■□□□□ 0.11
HMGN1-203ENST00000380748 METTL7AQ9H8H3 244 aa15.71■□□□□ 0.11
HMGN1-203ENST00000380748 SERHLQ9NQF3 203 aa15.71■□□□□ 0.11
HMGN1-203ENST00000380748 DNAJC11Q9NVH1 559 aa15.71■□□□□ 0.11
HMGN1-203ENST00000380748 WWOXQ9NZC7 414 aa15.71■□□□□ 0.11
HMGN1-203ENST00000380748 HAX1O00165 279 aa15.7■□□□□ 0.1
HMGN1-203ENST00000380748 TAPBPO15533 448 aa15.7■□□□□ 0.1
HMGN1-203ENST00000380748 TLX2O43763 284 aaPredicted RBP15.7■□□□□ 0.1
HMGN1-203ENST00000380748 POU2F1P14859 743 aa15.7■□□□□ 0.1
HMGN1-203ENST00000380748 CHMP24386 653 aa15.7■□□□□ 0.1
HMGN1-203ENST00000380748 LHX2P50458 406 aa15.7■□□□□ 0.1
HMGN1-203ENST00000380748 RPP38P78345 283 aaKnown RBP15.7■□□□□ 0.1
HMGN1-203ENST00000380748 TNFRSF17Q02223 184 aa15.7■□□□□ 0.1
HMGN1-203ENST00000380748 BIKQ13323 160 aa15.7■□□□□ 0.1
HMGN1-203ENST00000380748 CHRFAM7AQ494W8 412 aa15.7■□□□□ 0.1
HMGN1-203ENST00000380748 TEDDM1Q5T9Z0 273 aa15.7■□□□□ 0.1
HMGN1-203ENST00000380748 ANKRD34AQ69YU3 496 aa15.7■□□□□ 0.1
HMGN1-203ENST00000380748 DESI1Q6ICB0 168 aa15.7■□□□□ 0.1
HMGN1-203ENST00000380748 SNX31Q8N9S9 440 aa15.7■□□□□ 0.1
HMGN1-203ENST00000380748 RDH11Q8TC12 318 aa15.7■□□□□ 0.1
HMGN1-203ENST00000380748 ZNF473Q8WTR7 871 aaKnown RBP15.7■□□□□ 0.1
HMGN1-203ENST00000380748 ANKRD7Q92527 254 aa15.7■□□□□ 0.1
HMGN1-203ENST00000380748 ESAMQ96AP7 390 aa15.7■□□□□ 0.1
HMGN1-203ENST00000380748 WDR34Q96EX3 536 aa15.7■□□□□ 0.1
HMGN1-203ENST00000380748 PGM2Q96G03 612 aa15.7■□□□□ 0.1
HMGN1-203ENST00000380748 CERS2Q96G23 380 aa15.7■□□□□ 0.1
HMGN1-203ENST00000380748 PELOQ9BRX2 385 aaKnown RBP15.7■□□□□ 0.1
HMGN1-203ENST00000380748 EFCAB11Q9BUY7 163 aa15.7■□□□□ 0.1
HMGN1-203ENST00000380748 CAPS2Q9BXY5 557 aa15.7■□□□□ 0.1
HMGN1-203ENST00000380748 REG4Q9BYZ8 158 aa15.7■□□□□ 0.1
HMGN1-203ENST00000380748 GALNT9Q9HCQ5 603 aa15.7■□□□□ 0.1
HMGN1-203ENST00000380748 PRM3Q9NNZ6 103 aa15.7■□□□□ 0.1
HMGN1-203ENST00000380748 CORO1CQ9ULV4 474 aaPredicted RBP15.7■□□□□ 0.1
HMGN1-203ENST00000380748 GUCA1BQ9UMX6 200 aa15.7■□□□□ 0.1
HMGN1-203ENST00000380748 MAPRE3Q9UPY8 281 aa15.7■□□□□ 0.1
HMGN1-203ENST00000380748 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.69■□□□□ 0.14e-11■■■■■ 27.5
HMGN1-203ENST00000380748 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.69■□□□□ 0.1
HMGN1-203ENST00000380748 C16orf97H3BN30 126 aa15.69■□□□□ 0.1
HMGN1-203ENST00000380748 PLAUP00749 431 aa15.69■□□□□ 0.1
HMGN1-203ENST00000380748 TGFB1P01137 390 aa15.69■□□□□ 0.1
HMGN1-203ENST00000380748 HNRNPH2P55795 449 aaKnown RBP15.69■□□□□ 0.1
HMGN1-203ENST00000380748 GFRA1P56159 465 aa15.69■□□□□ 0.1
HMGN1-203ENST00000380748 SIRPAP78324 504 aa15.69■□□□□ 0.1
HMGN1-203ENST00000380748 FUT7Q11130 342 aa15.69■□□□□ 0.1
HMGN1-203ENST00000380748 KRTAP24-1Q3LI83 254 aa15.69■□□□□ 0.1
HMGN1-203ENST00000380748 TMEM35AQ53FP2 167 aa15.69■□□□□ 0.1
HMGN1-203ENST00000380748 HLA-DQA1Q5Y7H0 255 aa15.69■□□□□ 0.1
HMGN1-203ENST00000380748 ZNF704Q6ZNC4 412 aaPredicted RBP15.69■□□□□ 0.1
HMGN1-203ENST00000380748 ADAMTSL2Q86TH1 951 aa15.69■□□□□ 0.1
HMGN1-203ENST00000380748 GPR180Q86V85 440 aa15.69■□□□□ 0.1
HMGN1-203ENST00000380748 NKAPQ8N5F7 415 aaKnown RBP15.69■□□□□ 0.1
HMGN1-203ENST00000380748 ANKRD49Q8WVL7 239 aa15.69■□□□□ 0.1
HMGN1-203ENST00000380748 OR2B2Q9GZK3 357 aa15.69■□□□□ 0.1
HMGN1-203ENST00000380748 PLAC1Q9HBJ0 212 aa15.69■□□□□ 0.1
HMGN1-203ENST00000380748 PPANQ9NQ55 473 aaKnown RBP15.69■□□□□ 0.1
HMGN1-203ENST00000380748 MS4A12Q9NXJ0 267 aa15.69■□□□□ 0.1
HMGN1-203ENST00000380748 HEY2Q9UBP5 337 aa15.69■□□□□ 0.1
HMGN1-203ENST00000380748 CTNNAL1Q9UBT7 734 aa15.69■□□□□ 0.1
HMGN1-203ENST00000380748 DTX4Q9Y2E6 619 aa15.69■□□□□ 0.1
HMGN1-203ENST00000380748 A0A1W2PS29 197 aa15.68■□□□□ 0.1
HMGN1-203ENST00000380748 LRRC14BA6NHZ5 514 aa15.68■□□□□ 0.1
HMGN1-203ENST00000380748 GLOD5A6NK44 160 aa15.68■□□□□ 0.1
HMGN1-203ENST00000380748 HCRTR2O43614 444 aa15.68■□□□□ 0.1
HMGN1-203ENST00000380748 GPR75O95800 540 aa15.68■□□□□ 0.1
HMGN1-203ENST00000380748 ABCB1P08183 1280 aaPredicted RBP15.68■□□□□ 0.1
HMGN1-203ENST00000380748 ABCD3P28288 659 aa15.68■□□□□ 0.1
HMGN1-203ENST00000380748 PTGDSP41222 190 aa15.68■□□□□ 0.1
HMGN1-203ENST00000380748 KCNJ5P48544 419 aa15.68■□□□□ 0.1
HMGN1-203ENST00000380748 HSPA7P48741 367 aa15.68■□□□□ 0.1
HMGN1-203ENST00000380748 CLDN18P56856 261 aa15.68■□□□□ 0.1
HMGN1-203ENST00000380748 NRG3P56975 720 aa15.68■□□□□ 0.1
HMGN1-203ENST00000380748 RPS13P62277 151 aaKnown RBP15.68■□□□□ 0.1
HMGN1-203ENST00000380748 SPANXN3Q5MJ09 141 aa15.68■□□□□ 0.1
HMGN1-203ENST00000380748 SCIMPQ6UWF3 145 aa15.68■□□□□ 0.1
HMGN1-203ENST00000380748 P4HA3Q7Z4N8 544 aa15.68■□□□□ 0.1
HMGN1-203ENST00000380748 IFNEQ86WN2 208 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms