RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 CLECL1Q8IZS7 167 aa11.79□□□□□ -0.52
SMN1-202ENST00000380707 VWA5B2Q8N398 1253 aa11.79□□□□□ -0.52
SMN1-202ENST00000380707 GALNT16Q8N428 558 aa11.79□□□□□ -0.52
SMN1-202ENST00000380707 NATD1Q8N6N6 113 aa11.79□□□□□ -0.52
SMN1-202ENST00000380707 OR7G2Q8NG99 324 aa11.79□□□□□ -0.52
SMN1-202ENST00000380707 ZNF675Q8TD23 568 aa11.79□□□□□ -0.52
SMN1-202ENST00000380707 ELP5Q8TE02 316 aa11.79□□□□□ -0.52
SMN1-202ENST00000380707 VPS33AQ96AX1 596 aa11.79□□□□□ -0.52
SMN1-202ENST00000380707 OR52E6Q96RD3 313 aa11.79□□□□□ -0.52
SMN1-202ENST00000380707 NUDT9Q9BW91 350 aa11.79□□□□□ -0.52
SMN1-202ENST00000380707 SEMA4CQ9C0C4 833 aa11.79□□□□□ -0.52
SMN1-202ENST00000380707 PRORYQ9H606 182 aa11.79□□□□□ -0.52
SMN1-202ENST00000380707 MMP25Q9NPA2 562 aa11.79□□□□□ -0.52
SMN1-202ENST00000380707 SLC52A3Q9NQ40 469 aa11.79□□□□□ -0.52
SMN1-202ENST00000380707 ZNF223Q9UK11 482 aaPredicted RBP11.79□□□□□ -0.52
SMN1-202ENST00000380707 CACNA1GO43497 2377 aa11.79□□□□□ -0.52
SMN1-202ENST00000380707 PRSS51A0A1B0GVH4 220 aa11.78□□□□□ -0.52
SMN1-202ENST00000380707 A6NL46 340 aa11.78□□□□□ -0.52
SMN1-202ENST00000380707 RNASET2O00584 256 aaKnown RBP11.78□□□□□ -0.52
SMN1-202ENST00000380707 C6orf47O95873 294 aa11.78□□□□□ -0.52
SMN1-202ENST00000380707 SERPINA7P05543 415 aa11.78□□□□□ -0.52
SMN1-202ENST00000380707 MC3RP41968 323 aa11.78□□□□□ -0.52
SMN1-202ENST00000380707 CDK9P50750 372 aaKnown RBP11.78□□□□□ -0.52
SMN1-202ENST00000380707 CCL11P51671 97 aa11.78□□□□□ -0.52
SMN1-202ENST00000380707 SLC37A1P57057 533 aa11.78□□□□□ -0.52
SMN1-202ENST00000380707 HBA1P69905 142 aa11.78□□□□□ -0.52
SMN1-202ENST00000380707 DUSP8Q13202 625 aa11.78□□□□□ -0.52
SMN1-202ENST00000380707 RCAN2Q14206 197 aa11.78□□□□□ -0.52
SMN1-202ENST00000380707 EXOSC7Q15024 291 aaKnown RBP11.78□□□□□ -0.52
SMN1-202ENST00000380707 TBR1Q16650 682 aa11.78□□□□□ -0.52
SMN1-202ENST00000380707 TIGD2Q4W5G0 525 aa11.78□□□□□ -0.52
SMN1-202ENST00000380707 FHL5Q5TD97 284 aa11.78□□□□□ -0.52
SMN1-202ENST00000380707 ANXA8L1Q5VT79 327 aa11.78□□□□□ -0.52
SMN1-202ENST00000380707 MTERF4Q7Z6M4 381 aaKnown RBP11.78□□□□□ -0.52
SMN1-202ENST00000380707 ZFP28Q8NHY6 868 aa11.78□□□□□ -0.52
SMN1-202ENST00000380707 APOBEC4Q8WW27 367 aaKnown RBP11.78□□□□□ -0.52
SMN1-202ENST00000380707 OR5P2Q8WZ92 322 aa11.78□□□□□ -0.52
SMN1-202ENST00000380707 ELP4Q96EB1 424 aa11.78□□□□□ -0.52
SMN1-202ENST00000380707 VMP1Q96GC9 406 aa11.78□□□□□ -0.52
SMN1-202ENST00000380707 THOC3Q96J01 351 aaKnown RBP11.78□□□□□ -0.52
SMN1-202ENST00000380707 SIRT3Q9NTG7 399 aaPredicted RBP11.78□□□□□ -0.52
SMN1-202ENST00000380707 TMEM45AQ9NWC5 275 aa11.78□□□□□ -0.52
SMN1-202ENST00000380707 FAM120CQ9NX05 1096 aaKnown RBP11.78□□□□□ -0.52
SMN1-202ENST00000380707 ARMCX1Q9P291 453 aa11.78□□□□□ -0.52
SMN1-202ENST00000380707 COPS7AQ9UBW8 275 aa11.78□□□□□ -0.52
SMN1-202ENST00000380707 ARL2BPQ9Y2Y0 163 aa11.78□□□□□ -0.52
SMN1-202ENST00000380707 TRBV11-1A0A0K0K1C0 115 aa11.77□□□□□ -0.52
SMN1-202ENST00000380707 PLOD2O00469 737 aa11.77□□□□□ -0.52
SMN1-202ENST00000380707 NR5A2O00482 541 aa11.77□□□□□ -0.52
SMN1-202ENST00000380707 FCHO1O14526 889 aa11.77□□□□□ -0.52
SMN1-202ENST00000380707 CFLARO15519 480 aa11.77□□□□□ -0.52
SMN1-202ENST00000380707 PRKNO60260 465 aaPredicted RBP11.77□□□□□ -0.52
SMN1-202ENST00000380707 PLOD3O60568 738 aa11.77□□□□□ -0.52
SMN1-202ENST00000380707 NME6O75414 186 aaPredicted RBP11.77□□□□□ -0.52
SMN1-202ENST00000380707 CBX7O95931 251 aa11.77□□□□□ -0.52
SMN1-202ENST00000380707 ABCB1P08183 1280 aaPredicted RBP11.77□□□□□ -0.52
SMN1-202ENST00000380707 ITGA3P26006 1051 aa11.77□□□□□ -0.52
SMN1-202ENST00000380707 GPC1P35052 558 aa11.77□□□□□ -0.52
SMN1-202ENST00000380707 CLCN2P51788 898 aa11.77□□□□□ -0.52
SMN1-202ENST00000380707 SOX8P57073 446 aa11.77□□□□□ -0.52
SMN1-202ENST00000380707 RAPSNQ13702 412 aa11.77□□□□□ -0.52
SMN1-202ENST00000380707 VPS26BQ4G0F5 336 aa11.77□□□□□ -0.52
SMN1-202ENST00000380707 C6orf163Q5TEZ5 329 aa11.77□□□□□ -0.52
SMN1-202ENST00000380707 GKAP1Q5VSY0 366 aaPredicted RBP11.77□□□□□ -0.52
SMN1-202ENST00000380707 BORAQ6PGQ7 559 aa11.77□□□□□ -0.52
SMN1-202ENST00000380707 GK5Q6ZS86 529 aa11.77□□□□□ -0.52
SMN1-202ENST00000380707 C9orf40Q8IXQ3 194 aa11.77□□□□□ -0.52
SMN1-202ENST00000380707 ZNF615Q8N8J6 731 aa11.77□□□□□ -0.52
SMN1-202ENST00000380707 VPS37AQ8NEZ2 397 aa11.77□□□□□ -0.52
SMN1-202ENST00000380707 PSMA8Q8TAA3 256 aa11.77□□□□□ -0.52
SMN1-202ENST00000380707 BRIX1Q8TDN6 353 aaKnown RBP11.77□□□□□ -0.52
SMN1-202ENST00000380707 PSMF1Q92530 271 aa11.77□□□□□ -0.52
SMN1-202ENST00000380707 EXTL1Q92935 676 aa11.77□□□□□ -0.52
SMN1-202ENST00000380707 MAGED4Q96JG8 741 aa11.77□□□□□ -0.52
SMN1-202ENST00000380707 ART5Q96L15 291 aa11.77□□□□□ -0.52
SMN1-202ENST00000380707 CCDC115Q96NT0 180 aa11.77□□□□□ -0.52
SMN1-202ENST00000380707 TRIM4Q9C037 500 aa11.77□□□□□ -0.52
SMN1-202ENST00000380707 LHPPQ9H008 270 aa11.77□□□□□ -0.52
SMN1-202ENST00000380707 OR10A5Q9H207 317 aa11.77□□□□□ -0.52
SMN1-202ENST00000380707 CXorf36Q9H7Y0 433 aa11.77□□□□□ -0.52
SMN1-202ENST00000380707 SERHLQ9NQF3 203 aa11.77□□□□□ -0.52
SMN1-202ENST00000380707 A0A087WV62 115 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 ASPDHA6ND91 283 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 CCDC154A6NI56 674 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 TMEM200CA6NKL6 621 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 A8MUI8 341 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 UPK1AO00322 258 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 CCDC22O60826 627 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 SLITRK5O94991 958 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 ITGB2P05107 769 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 CAPN3P20807 821 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 EMDP50402 254 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 KCNK10P57789 538 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 KLF10Q13118 480 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 COL28A1Q2UY09 1125 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 HSDL2Q6YN16 418 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 RNF111Q6ZNA4 994 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 GPR155Q7Z3F1 870 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 OR2L13Q8N349 312 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 SIRT6Q8N6T7 355 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms