RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 NKX2-4Q9H2Z4 354 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 MTG2Q9H4K7 406 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 TRPV5Q9NQA5 729 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 CTPS2Q9NRF8 586 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 SEMA3GQ9NS98 782 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 NDOR1Q9UHB4 597 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 CCL26Q9Y258 94 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 HS3ST2Q9Y278 367 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 FAM25AB3EWG3 89 aa13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 FAM25CB3EWG5 89 aa13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 FAM25GB3EWG6 89 aa13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 RTCAO00442 366 aaKnown RBP13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 B4GALT2O60909 372 aa13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 C1GALT1C1LP0DN25 315 aa13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 UQCRC2P22695 453 aa13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 CD79BP40259 229 aa13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 MLLT3P42568 568 aaPredicted RBP13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 SLC9A3P48764 834 aa13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 ARPC4P59998 168 aa13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 GINS1Q14691 196 aa13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 P2RY14Q15391 338 aa13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 BRAT1Q6PJG6 821 aa13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 CLDN22Q8N7P3 220 aa13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 GPA33Q99795 319 aa13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 CPEB1Q9BZB8 566 aaKnown RBP13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 FOXE1O00358 373 aaPredicted RBP13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 C1orf105O95561 183 aa13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 CPEP16870 476 aa13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 FAPQ12884 760 aa13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 GPR19Q15760 415 aa13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 OCLNQ16625 522 aa13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 LAPTM4BQ86VI4 370 aa13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 ZBED6CLQ96FA7 236 aaPredicted RBP13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 LMLNQ96KR4 655 aa13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 KCTD7Q96MP8 289 aa13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 NRTNQ99748 197 aa13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 GIMAP4Q9NUV9 329 aa13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 DYRK1BQ9Y463 629 aa13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 ALG5Q9Y673 324 aa13.36□□□□□ -0.27
CLCNKA-202ENST00000375692 M0R3H8 397 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 FAAHO00519 579 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 SEC14L5O43304 696 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 ATG13O75143 517 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 NCR1O76036 304 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 RAB36O95755 333 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 OLFM2O95897 454 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 LGI1O95970 557 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 ALAS2P22557 587 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 ERVK-21P61565 698 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 TMEM115Q12893 351 aaPredicted RBP13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 HSPB3Q12988 150 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 ZNF628Q5EBL2 1059 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 LCN1P1Q5VSP4 162 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 PODNL1Q6PEZ8 512 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 PLET1Q6UQ28 207 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 RFPL4BQ6ZWI9 263 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 METTL3Q86U44 580 aaKnown RBP13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 LSRQ86X29 649 aaPredicted RBP13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 KLHDC8AQ8IYD2 350 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 CFAP206Q8IYR0 622 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 ZNF557Q8N988 423 aaPredicted RBP13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 OR2A12Q8NGT7 310 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 GRPEL2Q8TAA5 225 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 MRPS31Q92665 395 aaKnown RBP13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 SNAPC3Q92966 411 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 OTUB1Q96FW1 271 aaPredicted RBP13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 FOPNLQ96NB1 174 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 ZNF582Q96NG8 517 aaPredicted RBP13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 NLKQ9UBE8 527 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 TESQ9UGI8 421 aaKnown RBP13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 MAFFQ9ULX9 164 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 DIMT1Q9UNQ2 313 aaKnown RBP13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 GPR52Q9Y2T5 361 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 RWDD3Q9Y3V2 267 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 ANHXE9PGG2 379 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 TPD52L2O43399 206 aaKnown RBP13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 HPGDSO60760 199 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 NME6O75414 186 aaPredicted RBP13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 MOSPD3O75425 235 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 RB1P06400 928 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 SRPRAP08240 638 aaKnown RBP13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 FABP5Q01469 135 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 TEAD2Q15562 447 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 HENMT1Q5T8I9 393 aaKnown RBP13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 HSDL2Q6YN16 418 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 HTR3DQ70Z44 454 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 GRASPQ7Z6J2 395 aaPredicted RBP13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 ZER1Q7Z7L7 766 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 Q8N402 240 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 RASSF5Q8WWW0 418 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 DCLRE1CQ96SD1 692 aaKnown RBP13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 ACAT2Q9BWD1 397 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 TMEM245Q9H330 911 aa13.35□□□□□ -0.27
CLCNKA-202ENST00000375692 ZNF780AO75290 641 aaPredicted RBP13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 RHOP08100 348 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 SLC2A2P11168 524 aaPredicted RBP13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 MMP11P24347 488 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 HOXD11P31277 338 aaPredicted RBP13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 VIPR1P32241 457 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 MANFP55145 182 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms