RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 KIAA1211LQ6NV74 962 aa20.01■□□□□ 0.79
UPF3A-202ENST00000375299 PODNL1Q6PEZ8 512 aa20.01■□□□□ 0.79
UPF3A-202ENST00000375299 CD300LDQ6UXZ3 194 aa20.01■□□□□ 0.79
UPF3A-202ENST00000375299 RAB8BQ92930 207 aa20.01■□□□□ 0.79
UPF3A-202ENST00000375299 RIOK2Q9BVS4 552 aaKnown RBP20.01■□□□□ 0.79
UPF3A-202ENST00000375299 A4GNTQ9UNA3 340 aa20.01■□□□□ 0.79
UPF3A-202ENST00000375299 HSPB11Q9Y547 144 aa20.01■□□□□ 0.79
UPF3A-202ENST00000375299 SMLR1H3BR10 107 aa20.01■□□□□ 0.79
UPF3A-202ENST00000375299 ALDH1A1P00352 501 aa20.01■□□□□ 0.79
UPF3A-202ENST00000375299 ACADMP11310 421 aa20.01■□□□□ 0.79
UPF3A-202ENST00000375299 CYP2A6P11509 494 aaPredicted RBP20.01■□□□□ 0.79
UPF3A-202ENST00000375299 VIPR1P32241 457 aa20.01■□□□□ 0.79
UPF3A-202ENST00000375299 IFNA8P32881 189 aa20.01■□□□□ 0.79
UPF3A-202ENST00000375299 NUDT1P36639 197 aa20.01■□□□□ 0.79
UPF3A-202ENST00000375299 ETV3P41162 512 aa20.01■□□□□ 0.79
UPF3A-202ENST00000375299 GIPRP48546 466 aa20.01■□□□□ 0.79
UPF3A-202ENST00000375299 PRLHRP49683 370 aa20.01■□□□□ 0.79
UPF3A-202ENST00000375299 POLR2LP62875 67 aaKnown RBP20.01■□□□□ 0.79
UPF3A-202ENST00000375299 EFNB1P98172 346 aa20.01■□□□□ 0.79
UPF3A-202ENST00000375299 NDUFA9Q16795 377 aa20.01■□□□□ 0.79
UPF3A-202ENST00000375299 CD200R1LQ6Q8B3 271 aa20.01■□□□□ 0.79
UPF3A-202ENST00000375299 RNFT2Q96EX2 444 aa20.01■□□□□ 0.79
UPF3A-202ENST00000375299 QRFPRQ96P65 431 aa20.01■□□□□ 0.79
UPF3A-202ENST00000375299 ATF6BQ99941 703 aa20.01■□□□□ 0.79
UPF3A-202ENST00000375299 SORBS1Q9BX66 1292 aaKnown RBP20.01■□□□□ 0.79
UPF3A-202ENST00000375299 A0A1W2PQ72 361 aa20■□□□□ 0.79
UPF3A-202ENST00000375299 ZSCAN5BA6NJL1 495 aa20■□□□□ 0.79
UPF3A-202ENST00000375299 WASHC1A8K0Z3 465 aa20■□□□□ 0.79
UPF3A-202ENST00000375299 ANHXE9PGG2 379 aa20■□□□□ 0.79
UPF3A-202ENST00000375299 C1orf105O95561 183 aa20■□□□□ 0.79
UPF3A-202ENST00000375299 CTSAP10619 480 aa20■□□□□ 0.79
UPF3A-202ENST00000375299 MMP11P24347 488 aa20■□□□□ 0.79
UPF3A-202ENST00000375299 PBLDP30039 288 aaPredicted RBP20■□□□□ 0.79
UPF3A-202ENST00000375299 CDK5Q00535 292 aa20■□□□□ 0.79
UPF3A-202ENST00000375299 PIN1Q13526 163 aaPredicted RBP20■□□□□ 0.79
UPF3A-202ENST00000375299 RIN1Q13671 783 aa20■□□□□ 0.79
UPF3A-202ENST00000375299 NFE2L1Q14494 772 aa20■□□□□ 0.79
UPF3A-202ENST00000375299 HENMT1Q5T8I9 393 aaKnown RBP20■□□□□ 0.79
UPF3A-202ENST00000375299 TYW3Q6IPR3 259 aaKnown RBP20■□□□□ 0.79
UPF3A-202ENST00000375299 GDPD4Q6W3E5 623 aa20■□□□□ 0.79
UPF3A-202ENST00000375299 LMNTD1Q8N9Z9 388 aa20■□□□□ 0.79
UPF3A-202ENST00000375299 FBXW2Q9UKT8 454 aa20■□□□□ 0.79
UPF3A-202ENST00000375299 ABT1Q9ULW3 272 aaKnown RBP20■□□□□ 0.79
UPF3A-202ENST00000375299 TRDV1A0A1B0GX56 115 aa20■□□□□ 0.79
UPF3A-202ENST00000375299 NOS1APO75052 506 aaPredicted RBP20■□□□□ 0.79
UPF3A-202ENST00000375299 EVX1P49640 407 aa20■□□□□ 0.79
UPF3A-202ENST00000375299 SNAPC1Q16533 368 aa20■□□□□ 0.79
UPF3A-202ENST00000375299 TPGS2Q68CL5 300 aa20■□□□□ 0.79
UPF3A-202ENST00000375299 ZER1Q7Z7L7 766 aa20■□□□□ 0.79
UPF3A-202ENST00000375299 OR5P2Q8WZ92 322 aa20■□□□□ 0.79
UPF3A-202ENST00000375299 LMLNQ96KR4 655 aa20■□□□□ 0.79
UPF3A-202ENST00000375299 KCNJ15Q99712 375 aa20■□□□□ 0.79
UPF3A-202ENST00000375299 SYNDIG1Q9H7V2 258 aa20■□□□□ 0.79
UPF3A-202ENST00000375299 SLAMF7Q9NQ25 335 aa20■□□□□ 0.79
UPF3A-202ENST00000375299 SEC14L3Q9UDX4 400 aa20■□□□□ 0.79
UPF3A-202ENST00000375299 EXOSC1Q9Y3B2 195 aaKnown RBP20■□□□□ 0.79
UPF3A-202ENST00000375299 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.99■□□□□ 0.79
UPF3A-202ENST00000375299 SGK494L7N484 410 aa19.99■□□□□ 0.79
UPF3A-202ENST00000375299 PRODHO43272 600 aa19.99■□□□□ 0.79
UPF3A-202ENST00000375299 SH3BP5O60239 455 aa19.99■□□□□ 0.79
UPF3A-202ENST00000375299 URODP06132 367 aa19.99■□□□□ 0.79
UPF3A-202ENST00000375299 EPHX1P07099 455 aa19.99■□□□□ 0.79
UPF3A-202ENST00000375299 RAB25P57735 213 aa19.99■□□□□ 0.79
UPF3A-202ENST00000375299 SLC5A11Q8WWX8 675 aa19.99■□□□□ 0.79
UPF3A-202ENST00000375299 GFM1Q96RP9 751 aaKnown RBP19.99■□□□□ 0.79
UPF3A-202ENST00000375299 ZNF607Q96SK3 696 aa19.99■□□□□ 0.79
UPF3A-202ENST00000375299 ZSCAN5AQ9BUG6 496 aa19.99■□□□□ 0.79
UPF3A-202ENST00000375299 SGPP1Q9BX95 441 aa19.99■□□□□ 0.79
UPF3A-202ENST00000375299 GALNT9Q9HCQ5 603 aa19.99■□□□□ 0.79
UPF3A-202ENST00000375299 ATP13A2Q9NQ11 1180 aa19.99■□□□□ 0.79
UPF3A-202ENST00000375299 CFAP97Q9P2B7 532 aa19.99■□□□□ 0.79
UPF3A-202ENST00000375299 TEKT2Q9UIF3 430 aa19.99■□□□□ 0.79
UPF3A-202ENST00000375299 SLC25A13Q9UJS0 675 aa19.99■□□□□ 0.79
UPF3A-202ENST00000375299 LOC102723532A0A0G2JNH3 316 aa19.99■□□□□ 0.79
UPF3A-202ENST00000375299 CXorf51AA0A1B0GTR3 108 aa19.99■□□□□ 0.79
UPF3A-202ENST00000375299 A0A1W2PRQ8 180 aa19.99■□□□□ 0.79
UPF3A-202ENST00000375299 INPP1P49441 399 aa19.99■□□□□ 0.79
UPF3A-202ENST00000375299 SMSP52788 366 aa19.99■□□□□ 0.79
UPF3A-202ENST00000375299 MRPL28Q13084 256 aaKnown RBP19.99■□□□□ 0.79
UPF3A-202ENST00000375299 NXPE4Q6UWF7 544 aa19.99■□□□□ 0.79
UPF3A-202ENST00000375299 SLC36A4Q6YBV0 504 aa19.99■□□□□ 0.79
UPF3A-202ENST00000375299 Q6ZVU0 165 aa19.99■□□□□ 0.79
UPF3A-202ENST00000375299 AKAP1Q92667 903 aaKnown RBP eCLIP19.99■□□□□ 0.79
UPF3A-202ENST00000375299 DHRS9Q9BPW9 319 aa19.99■□□□□ 0.79
UPF3A-202ENST00000375299 ARHGAP9Q9BRR9 750 aa19.99■□□□□ 0.79
UPF3A-202ENST00000375299 PAK6Q9NQU5 681 aaPredicted RBP19.99■□□□□ 0.79
UPF3A-202ENST00000375299 LOC105371267A0A1B0GV96 52 aa19.98■□□□□ 0.79
UPF3A-202ENST00000375299 HMGN4O00479 90 aa19.98■□□□□ 0.79
UPF3A-202ENST00000375299 PRRG1O14668 218 aa19.98■□□□□ 0.79
UPF3A-202ENST00000375299 MMP20O60882 483 aa19.98■□□□□ 0.79
UPF3A-202ENST00000375299 SOD1P00441 154 aa19.98■□□□□ 0.79
UPF3A-202ENST00000375299 HLA-FP30511 346 aa19.98■□□□□ 0.79
UPF3A-202ENST00000375299 EVI2BP34910 448 aa19.98■□□□□ 0.79
UPF3A-202ENST00000375299 CNTN1Q12860 1018 aa19.98■□□□□ 0.79
UPF3A-202ENST00000375299 WDR45BQ5MNZ6 344 aa19.98■□□□□ 0.79
UPF3A-202ENST00000375299 HTR3DQ70Z44 454 aa19.98■□□□□ 0.79
UPF3A-202ENST00000375299 C6orf120Q7Z4R8 191 aa19.98■□□□□ 0.79
UPF3A-202ENST00000375299 C11orf74Q86VG3 221 aa19.98■□□□□ 0.79
UPF3A-202ENST00000375299 IQCHQ86VS3 1027 aa19.98■□□□□ 0.79
UPF3A-202ENST00000375299 REM2Q8IYK8 340 aaPredicted RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms