RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 OR1J2Q8NGS2 313 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 USB1Q9BQ65 265 aaKnown RBP6.34□□□□□ -1.39
UBR4-204ENST00000375254 POPDC3Q9HBV1 291 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 CNTNAP2Q9UHC6 1331 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 OR6C75A6NL08 312 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 POP7O75817 140 aaKnown RBP6.34□□□□□ -1.39
UBR4-204ENST00000375254 EIF2B1Q14232 305 aaKnown RBP6.34□□□□□ -1.39
UBR4-204ENST00000375254 B3GNTL1Q67FW5 361 aaPredicted RBP6.34□□□□□ -1.39
UBR4-204ENST00000375254 FAM46BQ96A09 425 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 DUSP26Q9BV47 211 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 DCAF13Q9NV06 445 aaKnown RBP6.34□□□□□ -1.39
UBR4-204ENST00000375254 TSPAN16Q9UKR8 245 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 PI15O43692 258 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 MFSD11O43934 449 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 OR10H2O60403 315 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 ELAVL2Q12926 359 aaKnown RBP6.34□□□□□ -1.39
UBR4-204ENST00000375254 C15orf54Q8N8G6 183 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 ZNF384Q8TF68 577 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 PSMF1Q92530 271 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 FBXO32Q969P5 355 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 NSUN4Q96CB9 384 aaKnown RBP6.34□□□□□ -1.39
UBR4-204ENST00000375254 TUT1Q9H6E5 874 aaKnown RBP6.34□□□□□ -1.39
UBR4-204ENST00000375254 SLC27A5Q9Y2P5 690 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 SCG5P05408 212 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 AKAIN1P0CW23 69 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 ADRA1BP35368 520 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 TOMM34Q15785 309 aaPredicted RBP6.34□□□□□ -1.39
UBR4-204ENST00000375254 SERPINA11Q86U17 422 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 EGFP01133 1207 aa6.34□□□□□ -1.4
UBR4-204ENST00000375254 G0S2P27469 103 aa6.34□□□□□ -1.4
UBR4-204ENST00000375254 MTPNP58546 118 aa6.34□□□□□ -1.4
UBR4-204ENST00000375254 RNASE12Q5GAN4 147 aaKnown RBP6.34□□□□□ -1.4
UBR4-204ENST00000375254 C16orf59Q7L2K0 433 aa6.34□□□□□ -1.4
UBR4-204ENST00000375254 COQ8BQ96D53 544 aa6.34□□□□□ -1.4
UBR4-204ENST00000375254 HSD3B7Q9H2F3 369 aa6.34□□□□□ -1.4
UBR4-204ENST00000375254 MVB12BQ9H7P6 319 aa6.34□□□□□ -1.4
UBR4-204ENST00000375254 PLEKHA1Q9HB21 404 aa6.34□□□□□ -1.4
UBR4-204ENST00000375254 SDHAF3Q9NRP4 125 aa6.34□□□□□ -1.4
UBR4-204ENST00000375254 B3GAT3O94766 335 aa6.34□□□□□ -1.4
UBR4-204ENST00000375254 ATP5A1P25705 553 aaKnown RBP6.34□□□□□ -1.4
UBR4-204ENST00000375254 ICAM3P32942 547 aa6.34□□□□□ -1.4
UBR4-204ENST00000375254 CD86P42081 329 aa6.34□□□□□ -1.4
UBR4-204ENST00000375254 LRRC73Q5JTD7 316 aa6.34□□□□□ -1.4
UBR4-204ENST00000375254 CLEC6AQ6EIG7 209 aa6.34□□□□□ -1.4
UBR4-204ENST00000375254 CMTM1Q8IZ96 169 aa6.34□□□□□ -1.4
UBR4-204ENST00000375254 GPR22Q99680 433 aa6.34□□□□□ -1.4
UBR4-204ENST00000375254 BABAM2Q9NXR7 383 aa6.34□□□□□ -1.4
UBR4-204ENST00000375254 GABRDO14764 452 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 ZNF623O75123 536 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 IFNGR1P15260 489 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 FOXO1Q12778 655 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 SPIN3Q5JUX0 258 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 SPRED1Q7Z699 444 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 NXPE1Q8N323 547 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 SLC12A9Q9BXP2 914 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 TRBC2A0A5B9 178 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 J3QLW9 94 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 FHP07954 510 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 ZNF19P17023 458 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 POLR2GP62487 172 aaKnown RBP eCLIP6.33□□□□□ -1.4
UBR4-204ENST00000375254 TRMT11Q7Z4G4 463 aaKnown RBP6.33□□□□□ -1.4
UBR4-204ENST00000375254 CRAMP1Q96RY5 1269 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 GABRR3A8MPY1 467 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 CASRP41180 1078 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 OR2T2Q6IF00 324 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 ZNF620Q6ZNG0 422 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 IL17RCQ8NAC3 791 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 IER2Q9BTL4 223 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 KCNG2Q9UJ96 466 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 TRAPPC4Q9Y296 219 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 OSMP13725 252 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 AMY2BP19961 511 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 ZNF136P52737 540 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 TCTAP57738 103 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 LYRM7Q5U5X0 104 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 ETFRF1Q6IPR1 90 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 LCLAT1Q6UWP7 414 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 GRAPLQ8TC17 118 aaPredicted RBP6.33□□□□□ -1.4
UBR4-204ENST00000375254 CDKN2AIPNLQ96HQ2 116 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 TSSK3Q96PN8 268 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 CIPCQ9C0C6 399 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 TIMM22Q9Y584 194 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 F6UZH7 168 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 NCR1O76036 304 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 PMS2P2O95744 297 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 GSRP00390 522 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 BMP4P12644 408 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 UQCRC2P22695 453 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 GABRA5P31644 462 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 ZNF84P51523 738 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 EPHA4P54764 986 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 RPL7AP62424 266 aaKnown RBP6.33□□□□□ -1.4
UBR4-204ENST00000375254 SLC39A11Q8N1S5 342 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 SRRQ9GZT4 340 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 ADAM7Q9H2U9 754 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 SGK2Q9HBY8 427 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 MATN3O15232 486 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 LGI1O95970 557 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 GNRHRP30968 328 aa6.33□□□□□ -1.4
UBR4-204ENST00000375254 PBX2P40425 430 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms