RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 PDPK1O15530 556 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 WBP4O75554 376 aaKnown RBP14.68□□□□□ -0.06
CCDC40-202ENST00000374876 INHBBP09529 407 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 SDHBP21912 280 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 PSMB9P28065 219 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 PCBP3P57721 371 aaKnown RBP14.68□□□□□ -0.06
CCDC40-202ENST00000374876 REEP5Q00765 189 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 MVKQ03426 396 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 AQP6Q13520 282 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 CTF1Q16619 201 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 MICAQ29983 383 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 EXOC3L2Q2M3D2 409 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 CEACAM20Q6UY09 585 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 PRSS48Q7RTY5 328 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 LGI4Q8N135 537 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 OR4C15Q8NGM1 316 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 FERD3LQ96RJ6 166 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 PIP5K1AQ99755 562 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 MENTQ9BUN1 341 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 GSDMCQ9BYG8 508 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 OSGEPL1Q9H4B0 414 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 ZNF556Q9HAH1 456 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 POFUT2Q9Y2G5 429 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 CNOT1A5YKK6 2376 aaKnown RBP14.68□□□□□ -0.06
CCDC40-202ENST00000374876 TRBV23OR9-2A0A075B6M9 112 aa14.67□□□□□ -0.06
CCDC40-202ENST00000374876 PRAMEF33A0A0G2JMD5 474 aa14.67□□□□□ -0.06
CCDC40-202ENST00000374876 SPAARA0A1B0GVQ0 90 aa14.67□□□□□ -0.06
CCDC40-202ENST00000374876 PRAMEF25A6NGN4 478 aa14.67□□□□□ -0.06
CCDC40-202ENST00000374876 GPR89AB7ZAQ6 455 aa14.67□□□□□ -0.06
CCDC40-202ENST00000374876 C5orf58C9J3I9 102 aa14.67□□□□□ -0.06
CCDC40-202ENST00000374876 E9PQ18 207 aa14.67□□□□□ -0.06
CCDC40-202ENST00000374876 OR1F1O43749 312 aa14.67□□□□□ -0.06
CCDC40-202ENST00000374876 PRAMEF10O60809 474 aa14.67□□□□□ -0.06
CCDC40-202ENST00000374876 PFDN1O60925 122 aa14.67□□□□□ -0.06
CCDC40-202ENST00000374876 ZBTB11O95625 1053 aaPredicted RBP14.67□□□□□ -0.06
CCDC40-202ENST00000374876 GPR89BP0CG08 455 aa14.67□□□□□ -0.06
CCDC40-202ENST00000374876 ALPPL2P10696 532 aa14.67□□□□□ -0.06
CCDC40-202ENST00000374876 GGT2P36268 569 aa14.67□□□□□ -0.06
CCDC40-202ENST00000374876 ST13P50502 369 aaKnown RBP14.67□□□□□ -0.06
CCDC40-202ENST00000374876 NOVA1P51513 510 aaKnown RBP14.67□□□□□ -0.06
CCDC40-202ENST00000374876 CLCA4Q14CN2 919 aa14.67□□□□□ -0.06
CCDC40-202ENST00000374876 TRIP6Q15654 476 aaKnown RBP14.67□□□□□ -0.06
CCDC40-202ENST00000374876 REEP3Q6NUK4 255 aa14.67□□□□□ -0.06
CCDC40-202ENST00000374876 Q6ZPB1 254 aaPredicted RBP14.67□□□□□ -0.06
CCDC40-202ENST00000374876 AHSA2Q719I0 299 aa14.67□□□□□ -0.06
CCDC40-202ENST00000374876 NUDT13Q86X67 352 aa14.67□□□□□ -0.06
CCDC40-202ENST00000374876 BAHD1Q8TBE0 780 aaPredicted RBP14.67□□□□□ -0.06
CCDC40-202ENST00000374876 APH1BQ8WW43 257 aa14.67□□□□□ -0.06
CCDC40-202ENST00000374876 BCL7BQ9BQE9 202 aa14.67□□□□□ -0.06
CCDC40-202ENST00000374876 DUSP23Q9BVJ7 150 aa14.67□□□□□ -0.06
CCDC40-202ENST00000374876 PITHD1Q9GZP4 211 aaPredicted RBP14.67□□□□□ -0.06
CCDC40-202ENST00000374876 EPS8L2Q9H6S3 715 aa14.67□□□□□ -0.06
CCDC40-202ENST00000374876 RNF6Q9Y252 685 aa14.67□□□□□ -0.06
CCDC40-202ENST00000374876 A0A1W2PPV9 198 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 TRBC2A0A5B9 178 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 TBX19O60806 448 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 GABARAPO95166 117 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 LDOC1O95751 146 aaPredicted RBP14.66□□□□□ -0.06
CCDC40-202ENST00000374876 EML2O95834 649 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 VIPP01282 170 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 XCR1P46094 333 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 ID4P47928 161 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 MASP1P48740 699 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 BMXP51813 675 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 DGCR6Q14129 220 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 INAVAQ3KP66 663 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 SPDYE7PQ495Y7 208 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 C6orf132Q5T0Z8 1188 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 SYT6Q5T7P8 510 aaPredicted RBP14.66□□□□□ -0.06
CCDC40-202ENST00000374876 ADCK2Q7Z695 626 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 PATE1Q8WXA2 126 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 RGMAQ96B86 450 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 NEURL3Q96EH8 262 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 C12orf66Q96MD2 445 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 ABCG4Q9H172 646 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 NT5DC2Q9H857 520 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 NEUROD4Q9HD90 331 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 ACOT13Q9NPJ3 140 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 SLAMF7Q9NQ25 335 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 RLIMQ9NVW2 624 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 GALNT8Q9NY28 637 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 FTSJ1Q9UET6 329 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 B4DGG1 531 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 J3KTA2 159 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 SLC22A1O15245 554 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 NDUFS4O43181 175 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 CSRP1P21291 193 aaKnown RBP14.66□□□□□ -0.06
CCDC40-202ENST00000374876 RPS26P62854 115 aaKnown RBP14.66□□□□□ -0.06
CCDC40-202ENST00000374876 HSPB3Q12988 150 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 CCDC157Q569K6 752 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 SAXO2Q658L1 398 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 TNFAIP8L2Q6P589 184 aaPredicted RBP14.66□□□□□ -0.06
CCDC40-202ENST00000374876 C16orf87Q6PH81 154 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 SDR16C5Q8N3Y7 309 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 LINC01555Q8NAE3 123 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 PRDM8Q9NQV8 689 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 TBC1D29Q9UFV1 150 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 WDR37Q9Y2I8 494 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 ENPP4Q9Y6X5 453 aa14.66□□□□□ -0.06
CCDC40-202ENST00000374876 LY6G6EA0A0G2JKS1 128 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms