RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 A0A096LPI6 279 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 RNF103-CHMP3A0A140T963 221 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 EME2A4GXA9 379 aaPredicted RBP4.56□□□□□ -1.68
USP48-202ENST00000374730 FAM149AA5PLN7 773 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 PABPN1LA6NDY0 278 aaKnown RBP4.56□□□□□ -1.68
USP48-202ENST00000374730 POM121BA6NF01 834 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 LOC730098B7Z3J9 87 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 F5H0A9 414 aaPredicted RBP4.56□□□□□ -1.68
USP48-202ENST00000374730 ZNF701M0R085 212 aaPredicted RBP4.56□□□□□ -1.68
USP48-202ENST00000374730 PDLIM1O00151 329 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 UPK1AO00322 258 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 SYT5O00445 386 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 PLOD2O00469 737 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 EI24O14681 340 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 DSCR3O14972 297 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 CLOCKO15516 846 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 KCNAB3O43448 404 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 SPRY2O43597 315 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 RGS10O43665 173 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 DFNA5O60443 496 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 TPST1O60507 370 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 UGDHO60701 494 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 GMNNO75496 209 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 TIMP1P01033 207 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 UGT2B4P06133 528 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 RETP07949 1114 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 HIST1H2AGP0C0S8 130 aaPredicted RBP4.56□□□□□ -1.68
USP48-202ENST00000374730 BCKDHAP12694 445 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 APEHP13798 732 aaKnown RBP4.56□□□□□ -1.68
USP48-202ENST00000374730 ATP6V1B1P15313 513 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 NCK1P16333 377 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 CDH2P19022 906 aaPredicted RBP4.56□□□□□ -1.68
USP48-202ENST00000374730 HIST1H2ADP20671 130 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 CYP2A7P20853 494 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 ACVR2AP27037 513 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 CCR7P32248 378 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 CAPGP40121 348 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 DIO1P49895 249 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 CDK9P50750 372 aaKnown RBP4.56□□□□□ -1.68
USP48-202ENST00000374730 ALDH3A2P51648 485 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 DGKQP52824 942 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 CLDN8P56748 225 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 MTPNP58546 118 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 RPS14P62263 151 aaKnown RBP4.56□□□□□ -1.68
USP48-202ENST00000374730 ADARB1P78563 741 aaKnown RBP4.56□□□□□ -1.68
USP48-202ENST00000374730 HTRA4P83105 476 aaPredicted RBP4.56□□□□□ -1.68
USP48-202ENST00000374730 HMGCS1Q01581 520 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 PLOD1Q02809 727 aaPredicted RBP4.56□□□□□ -1.68
USP48-202ENST00000374730 CHRNB3Q05901 458 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 EPS8Q12929 822 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 MTAPQ13126 283 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 ARHGEF7Q14155 803 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 EFR3AQ14156 821 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 PTGR1Q14914 329 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 LARS2Q15031 903 aaKnown RBP4.56□□□□□ -1.68
USP48-202ENST00000374730 RBBP5Q15291 538 aaKnown RBP4.56□□□□□ -1.68
USP48-202ENST00000374730 ZNF77Q15935 545 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 MAPKAPK3Q16644 382 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 MPEG1Q2M385 716 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 ZNF750Q32MQ0 723 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 FAM174BQ3ZCQ3 159 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 FAM98BQ52LJ0 330 aaKnown RBP4.56□□□□□ -1.68
USP48-202ENST00000374730 CYBRD1Q53TN4 286 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 RUNDC3AQ59EK9 446 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 SPANXN4Q5MJ08 99 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 ATG9BQ674R7 924 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 SUSD1Q6UWL2 747 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 ABRAXAS1Q6UWZ7 409 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 GDPD4Q6W3E5 623 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 PATL1Q86TB9 770 aaKnown RBP4.56□□□□□ -1.68
USP48-202ENST00000374730 IFNEQ86WN2 208 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 CALHM3Q86XJ0 350 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 MSRB3Q8IXL7 192 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 MICU2Q8IYU8 434 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 CMTM8Q8IZV2 173 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 LIX1Q8N485 282 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 DHRSXQ8N5I4 330 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 TRAM1L1Q8N609 369 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 FAM47BQ8NA70 645 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 DDHD1Q8NEL9 900 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 OR2T12Q8NG77 320 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 ITFG1Q8TB96 612 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 PNPT1Q8TCS8 783 aaKnown RBP4.56□□□□□ -1.68
USP48-202ENST00000374730 HCAR2Q8TDS4 363 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 SELENOMQ8WWX9 145 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 HDAC2Q92769 488 aaKnown RBP4.56□□□□□ -1.68
USP48-202ENST00000374730 TESCQ96BS2 214 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 FBXL8Q96CD0 374 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 COQ8BQ96D53 544 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 OTUB2Q96DC9 234 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 DTNBP1Q96EV8 351 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 CMTM7Q96FZ5 175 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 METTL2AQ96IZ6 378 aaKnown RBP4.56□□□□□ -1.68
USP48-202ENST00000374730 ZNF583Q96ND8 569 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 VPS35Q96QK1 796 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 YME1L1Q96TA2 773 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 HBEGFQ99075 208 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 H2AFJQ9BTM1 129 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 CHID1Q9BWS9 393 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 UGT2B28Q9BY64 529 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms