RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 NUDT8Q8WV74 236 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 CIDECQ96AQ7 238 aaPredicted RBP10.57□□□□□ -0.72
HSPG2-202ENST00000374676 ZNF354BQ96LW1 612 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 RILPQ96NA2 401 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 AGAP4Q96P64 663 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 ZBTB18Q99592 522 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 SMAD5Q99717 465 aaKnown RBP10.57□□□□□ -0.72
HSPG2-202ENST00000374676 SLC25A23Q9BV35 468 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 CNPPD1Q9BV87 410 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 TMEM120AQ9BXJ8 343 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 TEKT2Q9UIF3 430 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 LHX6Q9UPM6 363 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 TRIM33Q9UPN9 1127 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 COL6A6A6NMZ7 2263 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 A0A087WV62 115 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 TRBV11-1A0A0K0K1C0 115 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 PRSS51A0A1B0GVH4 220 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 A0A1W2PRB8 838 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 OR6C76A6NM76 312 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 A8MUI8 341 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 SCN2BO60939 215 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 CBX7O95931 251 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 CLPSP04118 112 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 ALPPP05187 535 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 SFTPCP11686 197 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 DRD4P21917 467 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 GPX3P22352 226 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 IL12AP29459 219 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 KIR3DL1P43629 444 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 SEC24CP53992 1094 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 NME5P56597 212 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 WNT3P56703 355 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 STX1BP61266 288 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 RNF4P78317 190 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 PHC1P78364 1004 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 KCNAB2Q13303 367 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 LTB4RQ15722 352 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 PGS1Q32NB8 556 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 TRMT12Q53H54 448 aaKnown RBP10.56□□□□□ -0.72
HSPG2-202ENST00000374676 FHL5Q5TD97 284 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 ANXA8L1Q5VT79 327 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 IGFL2Q6UWQ7 119 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 ISLR2Q6UXK2 745 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 RNF111Q6ZNA4 994 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 ZNF551Q7Z340 670 aaPredicted RBP10.56□□□□□ -0.72
HSPG2-202ENST00000374676 RPS19BP1Q86WX3 136 aaKnown RBP10.56□□□□□ -0.72
HSPG2-202ENST00000374676 HPS6Q86YV9 775 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 MIER2Q8N344 545 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 SLC5A8Q8N695 610 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 EXD3Q8N9H8 876 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 LSM14AQ8ND56 463 aaKnown RBP10.56□□□□□ -0.72
HSPG2-202ENST00000374676 VPS37AQ8NEZ2 397 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 OR5L2Q8NGL0 311 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 OR9A2Q8NGT5 310 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 PSMA8Q8TAA3 256 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 NUBPLQ8TB37 319 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 DOK4Q8TEW6 326 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 OR5P2Q8WZ92 322 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 KAT2AQ92830 837 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 ELP4Q96EB1 424 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 ABHD17AQ96GS6 310 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 MARK4Q96L34 752 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 TEX37Q96LM6 180 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 OR10A5Q9H207 317 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 RYDENQ9NUL5 291 aaKnown RBP10.56□□□□□ -0.72
HSPG2-202ENST00000374676 CFL2Q9Y281 166 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 CFAP46Q8IYW2 2715 aa10.56□□□□□ -0.72
HSPG2-202ENST00000374676 TMEM200CA6NKL6 621 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 RNASET2O00584 256 aaKnown RBP10.55□□□□□ -0.72
HSPG2-202ENST00000374676 PRKNO60260 465 aaPredicted RBP10.55□□□□□ -0.72
HSPG2-202ENST00000374676 IL6P05231 212 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 FAM87AP0C7U9 286 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 SSTR4P31391 388 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 S100A3P33764 101 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 PTGER1P34995 402 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 ZFP36L2P47974 494 aaKnown RBP10.55□□□□□ -0.72
HSPG2-202ENST00000374676 MLF1P58340 268 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 MRPS35P82673 323 aaKnown RBP10.55□□□□□ -0.72
HSPG2-202ENST00000374676 MFAP5Q13361 173 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 RAPSNQ13702 412 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 SQLEQ14534 574 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 MEP1AQ16819 746 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 FAM174BQ3ZCQ3 159 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 SPANXN4Q5MJ08 99 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 ACER2Q5QJU3 275 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 OR4F3Q6IEY1 312 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 PAOXQ6QHF9 649 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 PCSK4Q6UW60 755 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 IGFL3Q6UXB1 125 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 OR2L13Q8N349 312 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 CPSF7Q8N684 471 aaKnown RBP10.55□□□□□ -0.72
HSPG2-202ENST00000374676 SIRT6Q8N6T7 355 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 OR7G2Q8NG99 324 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 C10orf82Q8WW14 230 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 TP53INP1Q96A56 240 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 UBL7Q96S82 380 aaPredicted RBP10.55□□□□□ -0.72
HSPG2-202ENST00000374676 NPAS2Q99743 824 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 NSRP1Q9H0G5 558 aaKnown RBP10.55□□□□□ -0.72
HSPG2-202ENST00000374676 RABEP2Q9H5N1 569 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 CDCP1Q9H5V8 836 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms