RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 ABATP80404 500 aa16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 EIF4HQ15056 248 aaKnown RBP16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 GPR68Q15743 365 aa16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 ZNF605Q86T29 641 aa16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 OR11H4Q8NGC9 324 aa16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 OR9Q2Q8NGE9 314 aa16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 RC3H2Q9HBD1 1191 aaKnown RBP16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 CUEDC1Q9NWM3 386 aaPredicted RBP16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 OBSL1O75147 1896 aa16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 MOSPD3O75425 235 aa16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 IFNA7P01567 189 aa16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 HOXB6P17509 224 aaKnown RBP16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 GGT2P36268 569 aa16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 RPS13P62277 151 aaKnown RBP16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 ACSM2AQ08AH3 577 aa16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 ACSM2BQ68CK6 577 aa16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 TRAPPC5Q8IUR0 188 aa16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 CBARPQ8N350 705 aaPredicted RBP16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 WDR48Q8TAF3 677 aa16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 GTPBP3Q969Y2 492 aaKnown RBP16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 CIDECQ96AQ7 238 aaPredicted RBP16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 TMEM159Q96B96 161 aa16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 PKP4Q99569 1192 aa16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 ZNF416Q9BWM5 594 aa16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 OR2AG1Q9H205 316 aa16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 KCNH6Q9H252 994 aa16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 RDH14Q9HBH5 336 aa16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 SPHK2Q9NRA0 654 aa16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 UBQLN2Q9UHD9 624 aa16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 SAMD4AQ9UPU9 718 aaKnown RBP16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 PRELID3BQ9Y3B1 194 aa16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 KCNMB2Q9Y691 235 aa16.41■□□□□ 0.22
LDLRAP1-201ENST00000374338 NUMA1Q14980 2115 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 GABRR3A8MPY1 467 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 ORC5O43913 435 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 CLTBP09497 229 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 MYOGP15173 224 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 PTX3P26022 381 aaPredicted RBP16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 POU1F1P28069 291 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 MAPK8P45983 427 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 CAV3P56539 151 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 WNT3P56703 355 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 LYPLAL1Q5VWZ2 237 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 ATG9BQ674R7 924 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 ZNF600Q6ZNG1 722 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 PHF21AQ96BD5 680 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 WBP1Q96G27 269 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 IL4I1Q96RQ9 567 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 CERS4Q9HA82 394 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 CCNDBP1O95273 360 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 MPC2O95563 127 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 ANXA4P09525 319 aaPredicted RBP16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 CTSAP10619 480 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 F8A1P23610 371 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 KDELR2P33947 212 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 TMEM115Q12893 351 aaPredicted RBP16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 GAB1Q13480 694 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 COX20Q5RI15 118 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 MZT2BQ6NZ67 158 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 BCDIN3DQ7Z5W3 292 aaKnown RBP16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 PLPP6Q8IY26 295 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 CPXM2Q8N436 756 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 C19orf18Q8NEA5 215 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 ATP6V1C2Q8NEY4 427 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 HUS1BQ8NHY5 278 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 SPPL2AQ8TCT8 520 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 SLC9A6Q92581 669 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 RBP7Q96R05 134 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 GABARAPL3Q9BY60 117 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 HHATLQ9HCP6 504 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 PCDHB16Q9NRJ7 776 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 C5AR2Q9P296 337 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 STOX2Q9P2F5 926 aaPredicted RBP16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 GULP1Q9UBP9 304 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 VPS29Q9UBQ0 182 aa16.4■□□□□ 0.22
LDLRAP1-201ENST00000374338 OTOL1A6NHN0 477 aaPredicted RBP16.39■□□□□ 0.21
LDLRAP1-201ENST00000374338 RFXAPO00287 272 aa16.39■□□□□ 0.21
LDLRAP1-201ENST00000374338 KCNK5O95279 499 aa16.39■□□□□ 0.21
LDLRAP1-201ENST00000374338 FCER2P06734 321 aa16.39■□□□□ 0.21
LDLRAP1-201ENST00000374338 ACSM4P0C7M7 580 aa16.39■□□□□ 0.21
LDLRAP1-201ENST00000374338 ELFN1P0C7U0 828 aa16.39■□□□□ 0.21
LDLRAP1-201ENST00000374338 SYN1P17600 705 aa16.39■□□□□ 0.21
LDLRAP1-201ENST00000374338 FEN1P39748 380 aaKnown RBP16.39■□□□□ 0.21
LDLRAP1-201ENST00000374338 SLC6A11P48066 632 aa16.39■□□□□ 0.21
LDLRAP1-201ENST00000374338 PTPN5P54829 565 aa16.39■□□□□ 0.21
LDLRAP1-201ENST00000374338 FCN2Q15485 313 aa16.39■□□□□ 0.21
LDLRAP1-201ENST00000374338 LILRA6Q6PI73 481 aa16.39■□□□□ 0.21
LDLRAP1-201ENST00000374338 HMGN2P46Q86SG4 172 aa16.39■□□□□ 0.21
LDLRAP1-201ENST00000374338 OR6C4Q8NGE1 309 aa16.39■□□□□ 0.21
LDLRAP1-201ENST00000374338 ASZ1Q8WWH4 475 aa16.39■□□□□ 0.21
LDLRAP1-201ENST00000374338 LYSMD1Q96S90 227 aa16.39■□□□□ 0.21
LDLRAP1-201ENST00000374338 SECISBP2Q96T21 854 aaKnown RBP16.39■□□□□ 0.21
LDLRAP1-201ENST00000374338 MCOLN1Q9GZU1 580 aa16.39■□□□□ 0.21
LDLRAP1-201ENST00000374338 TMEM168Q9H0V1 697 aa16.39■□□□□ 0.21
LDLRAP1-201ENST00000374338 PIGUQ9H490 435 aa16.39■□□□□ 0.21
LDLRAP1-201ENST00000374338 KCMF1Q9P0J7 381 aa16.39■□□□□ 0.21
LDLRAP1-201ENST00000374338 LOC102723532A0A0G2JNH3 316 aa16.39■□□□□ 0.21
LDLRAP1-201ENST00000374338 FAM227AF5H4B4 570 aa16.39■□□□□ 0.21
LDLRAP1-201ENST00000374338 RAB3AP20336 220 aa16.39■□□□□ 0.21
LDLRAP1-201ENST00000374338 APEX1P27695 318 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms