RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 PPCDCQ96CD2 204 aa17.25■□□□□ 0.35
CDX4-201ENST00000373514 CXorf21Q9HAI6 301 aa17.25■□□□□ 0.35
CDX4-201ENST00000373514 ZBTB20Q9HC78 741 aaPredicted RBP17.25■□□□□ 0.35
CDX4-201ENST00000373514 RALYQ9UKM9 306 aaKnown RBP17.25■□□□□ 0.35
CDX4-201ENST00000373514 IGSF10Q6WRI0 2623 aa17.24■□□□□ 0.35
CDX4-201ENST00000373514 SYNDIG1LA6NDD5 238 aa17.24■□□□□ 0.35
CDX4-201ENST00000373514 GABRR3A8MPY1 467 aa17.24■□□□□ 0.35
CDX4-201ENST00000373514 B2RBV5 119 aa17.24■□□□□ 0.35
CDX4-201ENST00000373514 ATP1B1P05026 303 aa17.24■□□□□ 0.35
CDX4-201ENST00000373514 HPCAL1P37235 193 aa17.24■□□□□ 0.35
CDX4-201ENST00000373514 MRPS35P82673 323 aaKnown RBP17.24■□□□□ 0.35
CDX4-201ENST00000373514 MAPRE2Q15555 327 aa17.24■□□□□ 0.35
CDX4-201ENST00000373514 CEBPEQ15744 281 aa17.24■□□□□ 0.35
CDX4-201ENST00000373514 FAM111BQ6SJ93 734 aa17.24■□□□□ 0.35
CDX4-201ENST00000373514 ASRGL1Q7L266 308 aa17.24■□□□□ 0.35
CDX4-201ENST00000373514 FUNDC1Q8IVP5 155 aa17.24■□□□□ 0.35
CDX4-201ENST00000373514 GALNT12Q8IXK2 581 aa17.24■□□□□ 0.35
CDX4-201ENST00000373514 CCDC116Q8IYX3 515 aa17.24■□□□□ 0.35
CDX4-201ENST00000373514 MORN4Q8NDC4 146 aa17.24■□□□□ 0.35
CDX4-201ENST00000373514 SIMC1Q8NDZ2 872 aa17.24■□□□□ 0.35
CDX4-201ENST00000373514 THAP3Q8WTV1 239 aaPredicted RBP17.24■□□□□ 0.35
CDX4-201ENST00000373514 VMP1Q96GC9 406 aa17.24■□□□□ 0.35
CDX4-201ENST00000373514 PELOQ9BRX2 385 aaKnown RBP17.24■□□□□ 0.35
CDX4-201ENST00000373514 SEMA4CQ9C0C4 833 aa17.24■□□□□ 0.35
CDX4-201ENST00000373514 LRMDAQ9H2I8 198 aa17.24■□□□□ 0.35
CDX4-201ENST00000373514 ANKRA2Q9H9E1 313 aa17.24■□□□□ 0.35
CDX4-201ENST00000373514 MAT2BQ9NZL9 334 aa17.24■□□□□ 0.35
CDX4-201ENST00000373514 ZIM2Q9NZV7 527 aa17.24■□□□□ 0.35
CDX4-201ENST00000373514 PSME2Q9UL46 239 aa17.24■□□□□ 0.35
CDX4-201ENST00000373514 PPIEQ9UNP9 301 aaKnown RBP17.24■□□□□ 0.35
CDX4-201ENST00000373514 WBP11Q9Y2W2 641 aaKnown RBP17.24■□□□□ 0.35
CDX4-201ENST00000373514 PIEZO2Q9H5I5 2752 aa17.24■□□□□ 0.35
CDX4-201ENST00000373514 ATRXP46100 2492 aa17.23■□□□□ 0.35
CDX4-201ENST00000373514 MYO1GB0I1T2 1018 aa17.23■□□□□ 0.35
CDX4-201ENST00000373514 C9JVG2 144 aa17.23■□□□□ 0.35
CDX4-201ENST00000373514 MKRN2OSH3BPM6 223 aa17.23■□□□□ 0.35
CDX4-201ENST00000373514 ANKRD28O15084 1053 aa17.23■□□□□ 0.35
CDX4-201ENST00000373514 SSTR4P31391 388 aa17.23■□□□□ 0.35
CDX4-201ENST00000373514 MNAT1P51948 309 aa17.23■□□□□ 0.35
CDX4-201ENST00000373514 UFM1P61960 85 aa17.23■□□□□ 0.35
CDX4-201ENST00000373514 MGAT2Q10469 447 aa17.23■□□□□ 0.35
CDX4-201ENST00000373514 PRICKLE4Q2TBC4 344 aa17.23■□□□□ 0.35
CDX4-201ENST00000373514 RIMKLAQ8IXN7 391 aa17.23■□□□□ 0.35
CDX4-201ENST00000373514 FBXO27Q8NI29 283 aa17.23■□□□□ 0.35
CDX4-201ENST00000373514 BBS4Q96RK4 519 aa17.23■□□□□ 0.35
CDX4-201ENST00000373514 LIN28AQ9H9Z2 209 aaKnown RBP17.23■□□□□ 0.35
CDX4-201ENST00000373514 ZNF71Q9NQZ8 489 aaPredicted RBP17.23■□□□□ 0.35
CDX4-201ENST00000373514 GIMAP4Q9NUV9 329 aa17.23■□□□□ 0.35
CDX4-201ENST00000373514 SH3BP4Q9P0V3 963 aa17.23■□□□□ 0.35
CDX4-201ENST00000373514 A8MUI8 341 aa17.22■□□□□ 0.35
CDX4-201ENST00000373514 PDPK1O15530 556 aa17.22■□□□□ 0.35
CDX4-201ENST00000373514 SLC22A3O75751 556 aa17.22■□□□□ 0.35
CDX4-201ENST00000373514 DNAJC8O75937 253 aaPredicted RBP17.22■□□□□ 0.35
CDX4-201ENST00000373514 IGKV3-11P04433 115 aa17.22■□□□□ 0.35
CDX4-201ENST00000373514 SNRPB2P08579 225 aaKnown RBP17.22■□□□□ 0.35
CDX4-201ENST00000373514 ICAM2P13598 275 aa17.22■□□□□ 0.35
CDX4-201ENST00000373514 NTSP30990 170 aa17.22■□□□□ 0.35
CDX4-201ENST00000373514 SOX11P35716 441 aa17.22■□□□□ 0.35
CDX4-201ENST00000373514 NCBP2P52298 156 aaKnown RBP eCLIP17.22■□□□□ 0.35
CDX4-201ENST00000373514 MXRA7P84157 204 aa17.22■□□□□ 0.35
CDX4-201ENST00000373514 DUSP8Q13202 625 aa17.22■□□□□ 0.35
CDX4-201ENST00000373514 BIKQ13323 160 aa17.22■□□□□ 0.35
CDX4-201ENST00000373514 EXOSC7Q15024 291 aaKnown RBP17.22■□□□□ 0.35
CDX4-201ENST00000373514 IRAK1BP1Q5VVH5 260 aa17.22■□□□□ 0.35
CDX4-201ENST00000373514 LINC00696Q6ZRV3 163 aa17.22■□□□□ 0.35
CDX4-201ENST00000373514 C9orf40Q8IXQ3 194 aa17.22■□□□□ 0.35
CDX4-201ENST00000373514 OR1N1Q8NGS0 311 aa17.22■□□□□ 0.35
CDX4-201ENST00000373514 C9orf43Q8TAL5 461 aaPredicted RBP17.22■□□□□ 0.35
CDX4-201ENST00000373514 KAT2AQ92830 837 aa17.22■□□□□ 0.35
CDX4-201ENST00000373514 SENP5Q96HI0 755 aaPredicted RBP17.22■□□□□ 0.35
CDX4-201ENST00000373514 FBXL20Q96IG2 436 aa17.22■□□□□ 0.35
CDX4-201ENST00000373514 TEX37Q96LM6 180 aa17.22■□□□□ 0.35
CDX4-201ENST00000373514 BBC3Q96PG8 261 aaPredicted RBP17.22■□□□□ 0.35
CDX4-201ENST00000373514 UBL7Q96S82 380 aaPredicted RBP17.22■□□□□ 0.35
CDX4-201ENST00000373514 BTBD10Q9BSF8 475 aa17.22■□□□□ 0.35
CDX4-201ENST00000373514 GLIPR2Q9H4G4 154 aa17.22■□□□□ 0.35
CDX4-201ENST00000373514 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.22■□□□□ 0.35
CDX4-201ENST00000373514 TAS2R7Q9NYW3 318 aa17.22■□□□□ 0.35
CDX4-201ENST00000373514 TAS2R1Q9NYW7 299 aa17.22■□□□□ 0.35
CDX4-201ENST00000373514 ATP6V1HQ9UI12 483 aa17.22■□□□□ 0.35
CDX4-201ENST00000373514 RRP15Q9Y3B9 282 aaKnown RBP17.22■□□□□ 0.35
CDX4-201ENST00000373514 PCDHGA9Q9Y5G4 932 aaKnown RBP17.22■□□□□ 0.35
CDX4-201ENST00000373514 ZFYVE26Q68DK2 2539 aa17.22■□□□□ 0.35
CDX4-201ENST00000373514 NR5A2O00482 541 aa17.21■□□□□ 0.35
CDX4-201ENST00000373514 TBX19O60806 448 aa17.21■□□□□ 0.35
CDX4-201ENST00000373514 F10P00742 488 aa17.21■□□□□ 0.35
CDX4-201ENST00000373514 LAMP1P11279 417 aa17.21■□□□□ 0.35
CDX4-201ENST00000373514 PCSK2P16519 638 aa17.21■□□□□ 0.35
CDX4-201ENST00000373514 GALNSP34059 522 aa17.21■□□□□ 0.35
CDX4-201ENST00000373514 CD97P48960 835 aa17.21■□□□□ 0.35
CDX4-201ENST00000373514 CLCN2P51788 898 aa17.21■□□□□ 0.35
CDX4-201ENST00000373514 CLDN8P56748 225 aa17.21■□□□□ 0.35
CDX4-201ENST00000373514 TRMT12Q53H54 448 aaKnown RBP17.21■□□□□ 0.35
CDX4-201ENST00000373514 ZNF628Q5EBL2 1059 aa17.21■□□□□ 0.35
CDX4-201ENST00000373514 C6orf163Q5TEZ5 329 aa17.21■□□□□ 0.35
CDX4-201ENST00000373514 JMJD6Q6NYC1 403 aaPredicted RBP17.21■□□□□ 0.35
CDX4-201ENST00000373514 C16orf47Q6ZP98 133 aaPredicted RBP17.21■□□□□ 0.35
CDX4-201ENST00000373514 ZNF551Q7Z340 670 aaPredicted RBP17.21■□□□□ 0.35
CDX4-201ENST00000373514 FAM9CQ8IZT9 166 aa17.21■□□□□ 0.35
CDX4-201ENST00000373514 RBM15BQ8NDT2 890 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms