RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 FCRL5Q96RD9 977 aa13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 BAZ2AQ9UIF9 1905 aaKnown RBP13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 LRP5LA4QPB2 252 aa13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 S100A8P05109 93 aa13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 SYPP08247 313 aa13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 SLC1A3P43003 542 aa13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 PNLIPRP1P54315 467 aa13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 RPS27AP62979 156 aaKnown RBP13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 UBA52P62987 128 aaKnown RBP13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 SOX4Q06945 474 aaPredicted RBP13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 INCA1Q0VD86 236 aa13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 TMEM69Q5SWH9 247 aa13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 LINC00471Q8N535 108 aa13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 FAM160A2Q8N612 972 aaPredicted RBP13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 TMBIM1Q969X1 311 aa13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 EXOSC8Q96B26 276 aaKnown RBP13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 TGM7Q96PF1 710 aa13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 ARPC5LQ9BPX5 153 aa13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 EIF2B3Q9NR50 452 aaKnown RBP13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 NKX1-2Q9UD57 310 aaPredicted RBP13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 LOC102724200A0A096LPH7 203 aaPredicted RBP13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 A0A1W2PS29 197 aa13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 PRORSD1PA6NEY8 169 aa13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 TMEM150CB9EJG8 249 aa13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 HK3P52790 923 aa13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 C2orf80Q0P641 193 aa13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 COL13A1Q5TAT6 717 aaPredicted RBP13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 FIP1L1Q6UN15 594 aaKnown RBP13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 PXKQ7Z7A4 578 aa13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 LIX1Q8N485 282 aa13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 STYXL1Q9Y6J8 313 aa13.46□□□□□ -0.25
RAPGEF1-202ENST00000372190 C9JVG2 144 aa13.46□□□□□ -0.26
RAPGEF1-202ENST00000372190 AGPAT2O15120 278 aa13.46□□□□□ -0.26
RAPGEF1-202ENST00000372190 PI15O43692 258 aa13.46□□□□□ -0.26
RAPGEF1-202ENST00000372190 ITGA5P08648 1049 aa13.46□□□□□ -0.26
RAPGEF1-202ENST00000372190 GDF10P55107 478 aa13.46□□□□□ -0.26
RAPGEF1-202ENST00000372190 EEF1A1P68104 462 aaKnown RBP13.46□□□□□ -0.26
RAPGEF1-202ENST00000372190 ZNF33BQ06732 778 aa13.46□□□□□ -0.26
RAPGEF1-202ENST00000372190 GRIN2CQ14957 1233 aa13.46□□□□□ -0.26
RAPGEF1-202ENST00000372190 CLLU1OSQ5K130 101 aa13.46□□□□□ -0.26
RAPGEF1-202ENST00000372190 EEF1A1P5Q5VTE0 462 aa13.46□□□□□ -0.26
RAPGEF1-202ENST00000372190 LYSMD3Q7Z3D4 306 aa13.46□□□□□ -0.26
RAPGEF1-202ENST00000372190 MAPK15Q8TD08 544 aa13.46□□□□□ -0.26
RAPGEF1-202ENST00000372190 OR11A1Q9GZK7 315 aa13.46□□□□□ -0.26
RAPGEF1-202ENST00000372190 A0A1W2PRB8 838 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 GXYLT2A0PJZ3 443 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 C2orf78A6NCI8 922 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 J3QLW9 94 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 ZNF19P17023 458 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 CLCNKAP51800 687 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 RAB33AQ14088 237 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 ABHD13Q7L211 337 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 CD163Q86VB7 1156 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 TMEM41AQ96HV5 264 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 C10orf90Q96M02 699 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 EBF4Q9BQW3 602 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 PAAF1Q9BRP4 392 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 RGPD1P0DJD0 1748 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 KRBA1A5PL33 1030 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 JUNP05412 331 aaKnown RBP13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 CST5P28325 142 aaPredicted RBP13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 AQP2P41181 271 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 VIPR2P41587 438 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 POMZP3Q6PJE2 187 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 CPT1CQ8TCG5 803 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 AK6Q9Y3D8 172 aaKnown RBP13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 PCDHGA1Q9Y5H4 931 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 PEX12O00623 359 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 CPN1P15169 458 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 LSSP48449 732 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 RPS21P63220 83 aaKnown RBP13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 LGI4Q8N135 537 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 ZNF675Q8TD23 568 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 NINJ1Q92982 152 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 BORCS8Q96FH0 119 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 CACNG6Q9BXT2 260 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 ZDHHC7Q9NXF8 308 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 CNTN6Q9UQ52 1028 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 SLC7A4O43246 635 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 UBE2KP61086 200 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 GRIK2Q13002 908 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 SERINC3Q13530 473 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 DHCR24Q15392 516 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 NCBP2-AS2Q69YL0 99 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 ERN2Q76MJ5 926 aaKnown RBP13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 GLB1L3Q8NCI6 653 aaPredicted RBP13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 DCUN1D4Q92564 292 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 IL4I1Q96RQ9 567 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 LRRC3Q9BY71 257 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 RLIMQ9NVW2 624 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 LAMP5Q9UJQ1 280 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 PPM1HQ9ULR3 514 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 TMEM98Q9Y2Y6 226 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 RDH16O75452 317 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 TAS1R3Q7RTX0 852 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 TXNDC5Q8NBS9 432 aaKnown RBP13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 C7orf57Q8NEG2 295 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 OR2A12Q8NGT7 310 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 ASH2LQ9UBL3 628 aa13.45□□□□□ -0.26
RAPGEF1-202ENST00000372190 MYH13Q9UKX3 1938 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms