RNA–Protein interactions for RNA: ENST00000372097.9

GTF3C5-202, Transcript of general transcription factor IIIC subunit 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C5, Length 2,406 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-202ENST00000372097 UFD1Q92890 307 aa18.21■□□□□ 0.51
GTF3C5-202ENST00000372097 SENP5Q96HI0 755 aaPredicted RBP18.21■□□□□ 0.51
GTF3C5-202ENST00000372097 GFM1Q96RP9 751 aaKnown RBP18.21■□□□□ 0.51
GTF3C5-202ENST00000372097 ATF6BQ99941 703 aa18.21■□□□□ 0.51
GTF3C5-202ENST00000372097 SEMA3GQ9NS98 782 aa18.21■□□□□ 0.51
GTF3C5-202ENST00000372097 TAAR2Q9P1P5 351 aa18.21■□□□□ 0.51
GTF3C5-202ENST00000372097 SH2B3Q9UQQ2 575 aa18.21■□□□□ 0.51
GTF3C5-202ENST00000372097 CDH10Q9Y6N8 788 aa18.21■□□□□ 0.51
GTF3C5-202ENST00000372097 PRRG1O14668 218 aa18.2■□□□□ 0.5
GTF3C5-202ENST00000372097 APOL3O95236 402 aa18.2■□□□□ 0.5
GTF3C5-202ENST00000372097 SLBPQ14493 270 aaKnown RBP eCLIP18.2■□□□□ 0.5
GTF3C5-202ENST00000372097 TRILQ7L0X0 811 aa18.2■□□□□ 0.5
GTF3C5-202ENST00000372097 DNAJB7Q7Z6W7 309 aaPredicted RBP18.2■□□□□ 0.5
GTF3C5-202ENST00000372097 C9orf62Q8N4C0 152 aa18.2■□□□□ 0.5
GTF3C5-202ENST00000372097 AUTS2Q8WXX7 1259 aa18.2■□□□□ 0.5
GTF3C5-202ENST00000372097 TMEM159Q96B96 161 aa18.2■□□□□ 0.5
GTF3C5-202ENST00000372097 HYLS1Q96M11 299 aa18.2■□□□□ 0.5
GTF3C5-202ENST00000372097 FGF20Q9NP95 211 aaPredicted RBP18.2■□□□□ 0.5
GTF3C5-202ENST00000372097 KCNN3Q9UGI6 736 aa18.2■□□□□ 0.5
GTF3C5-202ENST00000372097 ICKQ9UPZ9 632 aa18.2■□□□□ 0.5
GTF3C5-202ENST00000372097 PCM1Q15154 2024 aa18.2■□□□□ 0.5
GTF3C5-202ENST00000372097 SGK494L7N484 410 aa18.2■□□□□ 0.5
GTF3C5-202ENST00000372097 TSPAN6O43657 245 aa18.2■□□□□ 0.5
GTF3C5-202ENST00000372097 NME6O75414 186 aaPredicted RBP18.2■□□□□ 0.5
GTF3C5-202ENST00000372097 IL3P08700 152 aa18.2■□□□□ 0.5
GTF3C5-202ENST00000372097 NPPBP16860 134 aa18.2■□□□□ 0.5
GTF3C5-202ENST00000372097 KCNJ5P48544 419 aa18.2■□□□□ 0.5
GTF3C5-202ENST00000372097 SYTL3Q4VX76 610 aa18.2■□□□□ 0.5
GTF3C5-202ENST00000372097 CD300LDQ6UXZ3 194 aa18.2■□□□□ 0.5
GTF3C5-202ENST00000372097 ARL14EPQ8N8R7 260 aaPredicted RBP18.2■□□□□ 0.5
GTF3C5-202ENST00000372097 SLAIN1Q8ND83 568 aa18.2■□□□□ 0.5
GTF3C5-202ENST00000372097 WDR34Q96EX3 536 aa18.2■□□□□ 0.5
GTF3C5-202ENST00000372097 TRMT2BQ96GJ1 504 aaKnown RBP18.2■□□□□ 0.5
GTF3C5-202ENST00000372097 ZNF354BQ96LW1 612 aa18.2■□□□□ 0.5
GTF3C5-202ENST00000372097 INMT-MINDY4F8WBC2 141 aa18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 SOD1P00441 154 aa18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 RAB40BQ12829 278 aa18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 COX10Q12887 443 aa18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 PIN1Q13526 163 aaPredicted RBP18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 DUSP6Q16828 381 aa18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 DEFB115Q30KQ5 88 aa18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 TXNDC8Q6A555 127 aa18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 PODNL1Q6PEZ8 512 aa18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 IDO2Q6ZQW0 420 aa18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 ZER1Q7Z7L7 766 aa18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 AKAP1Q92667 903 aaKnown RBP eCLIP18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 NEURL3Q96EH8 262 aa18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 DCLRE1CQ96SD1 692 aaKnown RBP18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 FAM83CQ9BQN1 747 aa18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 A4GNTQ9UNA3 340 aa18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 NINQ8N4C6 2090 aa18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 TRDV1A0A1B0GX56 115 aa18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 B8ZZF3 427 aa18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 ACP2P11117 423 aa18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 POU3F3P20264 500 aaPredicted RBP18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 MMP11P24347 488 aa18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 RAB25P57735 213 aa18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 SMIM11AP58511 58 aa18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 CDK5Q00535 292 aa18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 ZNF480Q8WV37 535 aa18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 MARVELD3Q96A59 401 aa18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 TMEM169Q96HH4 297 aa18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 COQ7Q99807 217 aa18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 ARHGAP9Q9BRR9 750 aa18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 ZDHHC6Q9H6R6 413 aa18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 MAT2BQ9NZL9 334 aa18.19■□□□□ 0.5
GTF3C5-202ENST00000372097 PIPSLA2A3N6 862 aa18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 ISM1B1AKI9 464 aa18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 CACNB4O00305 520 aaPredicted RBP18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 OR12D1P0DN82 309 aa18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 AVPR1BP47901 424 aa18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 AGFG1P52594 562 aaKnown RBP18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 TBPL1P62380 186 aa18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 MRPL28Q13084 256 aaKnown RBP18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 ZBTB37Q5TC79 503 aa18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 ZFP41Q8N8Y5 198 aa18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 SLC37A3Q8NCC5 494 aa18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 ZNF485Q8NCK3 441 aa18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 OR4M2Q8NGB6 313 aa18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 DNAJA4Q8WW22 397 aaPredicted RBP18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 RAB8BQ92930 207 aa18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 RNFT2Q96EX2 444 aa18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 GPA33Q99795 319 aa18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 EFCAB11Q9BUY7 163 aa18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 SYNDIG1Q9H7V2 258 aa18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 MIEF1Q9NQG6 463 aa18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 FBXW2Q9UKT8 454 aa18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 A0A1W2PRQ8 180 aa18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 SLC5A10A0PJK1 596 aa18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 ANKDD1BA6NHY2 528 aa18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 NCR1O76036 304 aa18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 SOD2P04179 222 aa18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 LIMS3P0CW19 117 aa18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 LIMS4P0CW20 117 aa18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 CD79BP40259 229 aa18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 CTSCP53634 463 aa18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 LSM11P83369 360 aaKnown RBP eCLIP18.18■□□□□ 0.51e-8■■□□□ 12.8
GTF3C5-202ENST00000372097 KIAA1211LQ6NV74 962 aa18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 HSD11B1LQ7Z5J1 315 aa18.18■□□□□ 0.5
GTF3C5-202ENST00000372097 NATD1Q8N6N6 113 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms