RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 GLYATL1Q969I3 302 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 ECHDC3Q96DC8 303 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 SLC12A9Q9BXP2 914 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 ZNF700Q9H0M5 742 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 LIPT1Q9Y234 373 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 A0A1B0GVI7 797 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 POU4F2Q12837 409 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 POU4F3Q15319 338 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 ARHGAP12Q8IWW6 846 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 CNOT2Q9NZN8 540 aaKnown RBP15.18■□□□□ 0.02
COL17A1-202ENST00000369733 NUBP2Q9Y5Y2 271 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 EMC8O43402 210 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 ATP5A1P25705 553 aaKnown RBP15.18■□□□□ 0.02
COL17A1-202ENST00000369733 NDUFS1P28331 727 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 GABRB3P28472 473 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 STK19P49842 368 aaPredicted RBP15.18■□□□□ 0.02
COL17A1-202ENST00000369733 NXPE4Q6UWF7 544 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 NRARPQ7Z6K4 114 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 MS4A15Q8N5U1 240 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 TOR1AIP2Q8NFQ8 470 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 OR6N2Q8NGY6 317 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 BRI3BPQ8WY22 251 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 DEFB118Q96PH6 123 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 ATG5Q9H1Y0 275 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 CLMPQ9H6B4 373 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 C14orf166Q9Y224 244 aaKnown RBP15.18■□□□□ 0.02
COL17A1-202ENST00000369733 ACTL7AQ9Y615 435 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 TCRBV5S1A1TA0A578 114 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 ZNF705EA8MWA4 302 aaPredicted RBP15.18■□□□□ 0.02
COL17A1-202ENST00000369733 CYB5AP00167 134 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 CCND3P30281 292 aaPredicted RBP15.18■□□□□ 0.02
COL17A1-202ENST00000369733 ID2Q02363 134 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 IER5LQ5T953 404 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 PLBD1Q6P4A8 553 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 TMEM107Q6UX40 140 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 GALNT7Q86SF2 657 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 FAM109AQ8N4B1 249 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 SGCDQ92629 289 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 TBL1XR1Q9BZK7 514 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 KCNK6Q9Y257 313 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 PTGESO14684 152 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 KMOO15229 486 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 TLX3O43711 291 aaPredicted RBP15.17■□□□□ 0.02
COL17A1-202ENST00000369733 VNN2O95498 520 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 HSD11B1P28845 292 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 GDI2P50395 445 aaKnown RBP15.17■□□□□ 0.02
COL17A1-202ENST00000369733 RNF144AP50876 292 aaPredicted RBP15.17■□□□□ 0.02
COL17A1-202ENST00000369733 ACTA2P62736 377 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 ACTG2P63267 376 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 USF2Q15853 346 aaPredicted RBP15.17■□□□□ 0.02
COL17A1-202ENST00000369733 UGT3A2Q3SY77 523 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 GLT8D1Q68CQ7 371 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 COMMD6Q7Z4G1 85 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 NRROSQ86YC3 692 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 Q8N9G6 341 aaPredicted RBP15.17■□□□□ 0.02
COL17A1-202ENST00000369733 GALNT11Q8NCW6 608 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 OR56A3Q8NH54 315 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 THAP4Q8WY91 577 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 CD300AQ9UGN4 299 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 SCDO00767 359 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 TYRP14679 529 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 AGTR1P30556 359 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 LMAN2Q12907 356 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 PRSS58Q8IYP2 241 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 NLGN2Q8NFZ4 835 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 C7orf34Q96L11 122 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 ACPTQ9BZG2 426 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 RABL2AQ9UBK7 228 aaPredicted RBP15.17■□□□□ 0.02
COL17A1-202ENST00000369733 RABL2BQ9UNT1 228 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 LOC102723532A0A0G2JNH3 316 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 RTCAO00442 366 aaKnown RBP15.17■□□□□ 0.02
COL17A1-202ENST00000369733 POLR2IP36954 125 aaKnown RBP15.17■□□□□ 0.02
COL17A1-202ENST00000369733 RHEBQ15382 184 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 FAM214AQ32MH5 1076 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 DNM1P34Q6PK57 102 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 PELI3Q8N2H9 469 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 OR4E2Q8NGC2 313 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 OR51J1Q9H342 316 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 CHD4Q14839 1912 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 K7ERQ8 282 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 TFP02787 698 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 ZNF14P17017 642 aaPredicted RBP15.17■□□□□ 0.02
COL17A1-202ENST00000369733 PRKACAP17612 351 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 CBLP22681 906 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 TATDN3Q17R31 274 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 GRHL2Q6ISB3 625 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 CBLL1Q75N03 491 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 ELMOD3Q96FG2 381 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 POTEKPQ9BYX7 375 aa15.17■□□□□ 0.02
COL17A1-202ENST00000369733 PNO1Q9NRX1 252 aaKnown RBP15.17■□□□□ 0.02
COL17A1-202ENST00000369733 GPR37L1O60883 481 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 LEFTY1O75610 366 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 UCHL1P09936 223 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 FGL1Q08830 312 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 TUBB3Q13509 450 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 ZNF584Q8IVC4 421 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 PIANPQ8IYJ0 282 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 MDGA1Q8NFP4 955 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 OR7G1Q8NGA0 311 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 THAP7Q9BT49 309 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms