RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 OR4K5Q8NGD3 323 aa17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 GANCQ8TET4 914 aa17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 KLHL25Q9H0H3 589 aa17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 EQTNQ9NQ60 294 aa17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 DPP7Q9UHL4 492 aa17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 GPSM3Q9Y4H4 160 aa17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 MYO9BQ13459 2157 aa17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 PRKYO43930 277 aa17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 CSO75390 466 aaKnown RBP17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 CLEC3AO75596 197 aa17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 APOL3O95236 402 aa17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 OXSR1O95747 527 aaPredicted RBP17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 SPNP16150 400 aa17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 SOX6P35712 828 aa17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 ZNF91Q05481 1191 aa17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 SPHARQ15513 63 aa17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 RAB42Q8N4Z0 105 aa17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 TMEM145Q8NBT3 493 aa17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 TMEM80Q96HE8 168 aa17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 DHRS1Q96LJ7 313 aa17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 NT5DC2Q9H857 520 aa17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 SYNPO2LQ9H987 977 aa17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 FZD3Q9NPG1 666 aa17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 MAN2B1O00754 1011 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 HAT1O14929 419 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 TP53P04637 393 aaPredicted RBP17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 DDX5P17844 614 aaKnown RBP17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 MAT2AP31153 395 aaKnown RBP17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 CSTF2P33240 577 aaKnown RBP eCLIP17.07■□□□□ 0.324e-9■■■■■ 30.8
UBQLN4-201ENST00000368309 RUNX3Q13761 415 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 C12orf73Q69YU5 71 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 C19orf48Q6RUI8 117 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 TMEM107Q6UX40 140 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 VITQ6UXI7 678 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 FBXL6Q8N531 539 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 RASSF5Q8WWW0 418 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 ITFG2Q969R8 447 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 ZG16BQ96DA0 208 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 CNRIP1Q96F85 164 aaPredicted RBP17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 MRPS30Q9NP92 439 aaKnown RBP17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 TAS2R7Q9NYW3 318 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 ADAM29Q9UKF5 820 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 ACAD8Q9UKU7 415 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 A3GALT2U3KPV4 340 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 FRS3O43559 492 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 MED26O95402 600 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 NTN1O95631 604 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 ZNF181Q2M3W8 571 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 GPAT3Q53EU6 434 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 ACSM5Q6NUN0 579 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 TUBA3EQ6PEY2 450 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 ACOT4Q8N9L9 421 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 OR8J1Q8NGP2 316 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 TAPBPLQ9BX59 468 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 DNMT3AQ9Y6K1 912 aaPredicted RBP17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 SAGE2PA6NJ88 616 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 RPS19P39019 145 aaKnown RBP17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 ZNF45Q02386 682 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 GINS1Q14691 196 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 TIMM50Q3ZCQ8 353 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 OR52E1Q8NGJ3 308 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 TRMT61AQ96FX7 289 aaKnown RBP17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 FAM210AQ96ND0 272 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 FUZQ9BT04 418 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 ASPNQ9BXN1 380 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 TPK1Q9H3S4 243 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 SPHK1Q9NYA1 384 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 PEX16Q9Y5Y5 336 aa17.07■□□□□ 0.32
UBQLN4-201ENST00000368309 SCG5P05408 212 aa17.06■□□□□ 0.32
UBQLN4-201ENST00000368309 HBQ1P09105 142 aa17.06■□□□□ 0.32
UBQLN4-201ENST00000368309 DRD2P14416 443 aa17.06■□□□□ 0.32
UBQLN4-201ENST00000368309 NTSP30990 170 aa17.06■□□□□ 0.32
UBQLN4-201ENST00000368309 TRIM23P36406 574 aa17.06■□□□□ 0.32
UBQLN4-201ENST00000368309 TGM4P49221 684 aa17.06■□□□□ 0.32
UBQLN4-201ENST00000368309 PRKCDQ05655 676 aa17.06■□□□□ 0.32
UBQLN4-201ENST00000368309 FUT5Q11128 374 aa17.06■□□□□ 0.32
UBQLN4-201ENST00000368309 C2orf27AQ580R0 203 aa17.06■□□□□ 0.32
UBQLN4-201ENST00000368309 FAM109BQ6ICB4 259 aaPredicted RBP17.06■□□□□ 0.32
UBQLN4-201ENST00000368309 MS4A6EQ96DS6 147 aa17.06■□□□□ 0.32
UBQLN4-201ENST00000368309 FAIM2Q9BWQ8 316 aa17.06■□□□□ 0.32
UBQLN4-201ENST00000368309 PLA2G2FQ9BZM2 168 aa17.06■□□□□ 0.32
UBQLN4-201ENST00000368309 POLR2J2Q9GZM3 115 aaKnown RBP17.06■□□□□ 0.32
UBQLN4-201ENST00000368309 MAN2C1Q9NTJ4 1040 aa17.06■□□□□ 0.32
UBQLN4-201ENST00000368309 C14orf119Q9NWQ9 140 aa17.06■□□□□ 0.32
UBQLN4-201ENST00000368309 ERVK13-1Q9NX77 482 aa17.06■□□□□ 0.32
UBQLN4-201ENST00000368309 RPL36Q9Y3U8 105 aaKnown RBP17.06■□□□□ 0.32
UBQLN4-201ENST00000368309 PCDHGB6Q9Y5F9 930 aa17.06■□□□□ 0.32
UBQLN4-201ENST00000368309 PNMA8CA0A1B0GUJ8 204 aa17.06■□□□□ 0.32
UBQLN4-201ENST00000368309 PIPP12273 146 aaPredicted RBP17.06■□□□□ 0.32
UBQLN4-201ENST00000368309 SMIM11AP58511 58 aa17.06■□□□□ 0.32
UBQLN4-201ENST00000368309 HYAL2Q12891 473 aa17.06■□□□□ 0.32
UBQLN4-201ENST00000368309 SPANXN2Q5MJ10 180 aa17.06■□□□□ 0.32
UBQLN4-201ENST00000368309 SLC6A20Q9NP91 592 aa17.06■□□□□ 0.32
UBQLN4-201ENST00000368309 SLC9A8Q9Y2E8 581 aa17.06■□□□□ 0.32
UBQLN4-201ENST00000368309 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.06■□□□□ 0.32
UBQLN4-201ENST00000368309 LSM2Q9Y333 95 aaKnown RBP17.06■□□□□ 0.32
UBQLN4-201ENST00000368309 COL4A3Q01955 1670 aa17.06■□□□□ 0.32
UBQLN4-201ENST00000368309 A0A1W2PRQ8 180 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 ISPDA4D126 451 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 RGS5O15539 181 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms