RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 TMEM69Q5SWH9 247 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 MARCH8Q5T0T0 291 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 ANKLE1Q8NAG6 615 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 PELOQ9BRX2 385 aaKnown RBP11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 CHIAQ9BZP6 476 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 CTPS2Q9NRF8 586 aa11.25□□□□□ -0.61
CDC42BPA-202ENST00000366764 PLXNA1Q9UIW2 1896 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 PTPRZ1P23471 2315 aaPredicted RBP11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 FXYD6-FXYD2A0A087WZ82 144 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 LEFTY2O00292 366 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 TEX28O15482 410 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 CDC40O60508 579 aaKnown RBP eCLIP11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 TAS2R38P59533 333 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 ADARB1P78563 741 aaKnown RBP11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 NTRK2Q16620 822 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 DHRS4L2Q6PKH6 230 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 ZNF280BQ86YH2 543 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 ASB11Q8WXH4 323 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 SLC39A13Q96H72 371 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 DEFB118Q96PH6 123 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 PINK1Q9BXM7 581 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 FXYD6Q9H0Q3 95 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 ASGR2P07307 311 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 TRAPPC2P0DI81 140 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 TRAPPC2BP0DI82 140 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 DDCP20711 480 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 GPR143P51810 404 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 CLDN22Q8N7P3 220 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 TMLHEQ9NVH6 421 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 RHCGQ9UBD6 479 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 WDR5P61964 334 aaKnown RBP11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 TEKQ02763 1124 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 FAM198BQ6UWH4 519 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 LRRC25Q8N386 305 aaPredicted RBP11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 SFXN5Q8TD22 340 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 POF1BQ8WVV4 589 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 KLHL21Q9UJP4 597 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 TRAV6A0A075B6T7 132 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 GXYLT2A0PJZ3 443 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 TMEM88BA6NKF7 163 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 PHYHO14832 338 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 CNIH2Q6PI25 160 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 LRRC56Q8IYG6 542 aaPredicted RBP11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 KIAA1143Q96AT1 154 aaPredicted RBP11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 MTG2Q9H4K7 406 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 NUBP2Q9Y5Y2 271 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 GPR89AB7ZAQ6 455 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 INPPL1O15357 1258 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 GPR89BP0CG08 455 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 SNTB2Q13425 540 aaKnown RBP11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 LRRC28Q86X40 367 aaPredicted RBP11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 SNX29P2Q8IUI4 249 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 ARMC10Q8N2F6 343 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 MED17Q9NVC6 651 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 TP53BP1Q12888 1972 aaPredicted RBP11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 AOAHP28039 575 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 OR3A3P47888 321 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 OR3A2P47893 321 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 RPS15AP62244 130 aaKnown RBP11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 SEMG2Q02383 582 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 LDLRAD1Q5T700 205 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 TAF8Q7Z7C8 310 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 ZNF583Q96ND8 569 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 CWH43Q9H720 699 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 MEPEQ9NQ76 525 aaPredicted RBP11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 UGT2A1Q9Y4X1 527 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 CLCA3PQ9Y6N3 262 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 CH25HO95992 272 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 AGXTP21549 392 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 POU6F2P78424 691 aaPredicted RBP11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 OR2L5Q8NG80 312 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 TMEM19Q96HH6 336 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 LAMP5Q9UJQ1 280 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 DNAJC13O75165 2243 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 WRBO00258 174 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 APOC1P02654 83 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 PRDX3P30048 256 aaKnown RBP11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 MAL2Q969L2 176 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 ZNF559Q9BR84 538 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 PRODH2Q9UF12 536 aa11.24□□□□□ -0.61
CDC42BPA-202ENST00000366764 FOXE1O00358 373 aaPredicted RBP11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 KIAA0355O15063 1070 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 RAB28P51157 221 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 OR12D2P58182 307 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 MADCAM1Q13477 382 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 TCEAL4Q96EI5 215 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 PRRC1Q96M27 445 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 NMNAT1Q9HAN9 279 aaPredicted RBP11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 INSL6Q9Y581 213 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 N6AMT1Q9Y5N5 214 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 SCGNO76038 276 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 GBAP04062 536 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 KLHL26Q53HC5 615 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 KDM4DQ6B0I6 523 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 FAM83HQ6ZRV2 1179 aaPredicted RBP11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 YIPF4Q9BSR8 244 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 PARGQ86W56 976 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 TMEM145Q8NBT3 493 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 GRHL3Q8TE85 626 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms