RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 DSC1Q08554 894 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 GNA13Q14344 377 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 SLC9A5Q14940 896 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 POU4F3Q15319 338 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 PODNL1Q6PEZ8 512 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 BRAT1Q6PJG6 821 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 SLC36A4Q6YBV0 504 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 LACC1Q8IV20 430 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 OR8J2Q8NGG1 315 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 OR5AR1Q8NGP9 310 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 AKAP1Q92667 903 aaKnown RBP eCLIP12.97□□□□□ -0.33
SGMS1-202ENST00000361781 DPF3Q92784 378 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 ECHDC3Q96DC8 303 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 BHLHE41Q9C0J9 482 aaPredicted RBP12.97□□□□□ -0.33
SGMS1-202ENST00000361781 TXNL4BQ9NX01 149 aaKnown RBP12.97□□□□□ -0.33
SGMS1-202ENST00000361781 SLC45A1Q9Y2W3 748 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 KLK4Q9Y5K2 254 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 LRRC37AA6NMS7 1700 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 QSER1Q2KHR3 1735 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 PSMB5P28074 263 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 GCGRP47871 477 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 CSRP3P50461 194 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 PRPF38BQ5VTL8 546 aaKnown RBP12.97□□□□□ -0.33
SGMS1-202ENST00000361781 TMEM107Q6UX40 140 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 OR4N5Q8IXE1 308 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 YAF2Q8IY57 180 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 SLC38A5Q8WUX1 472 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 HMGB4Q8WW32 186 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 IGSF21Q96ID5 467 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 MCHR1Q99705 422 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 PSD2Q9BQI7 771 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 QPCTLQ9NXS2 382 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 MBD1Q9UIS9 605 aaPredicted RBP12.97□□□□□ -0.33
SGMS1-202ENST00000361781 ALG5Q9Y673 324 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 BRWD1Q9NSI6 2320 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 ZNF860A6NHJ4 632 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 LRRC72A6NJI9 287 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 RPP14O95059 124 aaKnown RBP12.97□□□□□ -0.33
SGMS1-202ENST00000361781 CD3GP09693 182 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 ZNF8P17098 575 aaPredicted RBP12.97□□□□□ -0.33
SGMS1-202ENST00000361781 STOMP27105 288 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 HLA-FP30511 346 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 GIPRP48546 466 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 PRR5P85299 388 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 CDK10Q15131 360 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 NTRK2Q16620 822 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 LAIR2Q6ISS4 152 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 XKRXQ6PP77 449 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 CD300LGQ6UXG3 332 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 CCDC71Q8IV32 467 aaPredicted RBP12.97□□□□□ -0.33
SGMS1-202ENST00000361781 ZNF683Q8IZ20 524 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 KREMEN2Q8NCW0 462 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 ANKK1Q8NFD2 765 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 FUZQ9BT04 418 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 GSDMCQ9BYG8 508 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 SAP130Q9H0E3 1048 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 C12orf4Q9NQ89 552 aa12.97□□□□□ -0.33
SGMS1-202ENST00000361781 A0A075B6Q4 140 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 PRKRAO75569 313 aaKnown RBP12.96□□□□□ -0.33
SGMS1-202ENST00000361781 HLA-DQA2P01906 255 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 MPC1LP0DKB6 136 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 ACRP10323 421 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 GNSP15586 552 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 NT5EP21589 574 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 IMPA1P29218 277 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 UGT2B10P36537 528 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 PNLIPRP1P54315 467 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 KIAA0040Q15053 153 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 PLBD1Q6P4A8 553 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 FRRS1Q6ZNA5 592 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 CEACAM19Q7Z692 300 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 PGBD3Q8N328 593 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 OR8K5Q8NH50 307 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 SLC7A6Q92536 515 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 RFT1Q96AA3 541 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 RGMAQ96B86 450 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 PKMYT1Q99640 499 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 KLF16Q9BXK1 252 aaPredicted RBP12.96□□□□□ -0.33
SGMS1-202ENST00000361781 IKZF2Q9UKS7 526 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 ARID2Q68CP9 1835 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 ATG2BQ96BY7 2078 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 WASHC1A8K0Z3 465 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 PROM1O43490 865 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 CCR8P51685 355 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 PPP3R1P63098 170 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 CAP1Q01518 475 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 HYAL4Q2M3T9 481 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 WDR45BQ5MNZ6 344 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 WASH2PQ6VEQ5 465 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.96□□□□□ -0.337e-7■■■□□ 17.8
SGMS1-202ENST00000361781 RASGEF1AQ8N9B8 481 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 OR7G1Q8NGA0 311 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 CCDC3Q9BQI4 270 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 RSPH9Q9H1X1 276 aaPredicted RBP12.96□□□□□ -0.33
SGMS1-202ENST00000361781 CXorf36Q9H7Y0 433 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 PAK6Q9NQU5 681 aaPredicted RBP12.96□□□□□ -0.33
SGMS1-202ENST00000361781 ACER3Q9NUN7 267 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 IL36AQ9UHA7 158 aa12.96□□□□□ -0.33
SGMS1-202ENST00000361781 LTBP4Q8N2S1 1624 aa12.96□□□□□ -0.34
SGMS1-202ENST00000361781 RNASET2O00584 256 aaKnown RBP12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms