RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 DUS4LO95620 317 aaKnown RBP4.11□□□□□ -1.75
RPL39-201ENST00000361575 MBD3O95983 291 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 SP1P08047 785 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 CCDC159P0C7I6 412 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 AOC1P19801 751 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 PAX7P23759 505 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 FCGR2CP31995 323 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 MATKP42679 507 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 IFNAR2P48551 515 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 PEX3P56589 373 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 CYCSP99999 105 aaKnown RBP4.11□□□□□ -1.75
RPL39-201ENST00000361575 CDKL1Q00532 357 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 ZNF177Q13360 481 aaPredicted RBP4.11□□□□□ -1.75
RPL39-201ENST00000361575 ENPP2Q13822 863 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 HAGHQ16775 308 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 UPP1Q16831 310 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 UNC50Q53HI1 259 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 ARHGAP11AQ6P4F7 1023 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 CWC27Q6UX04 472 aaKnown RBP4.11□□□□□ -1.75
RPL39-201ENST00000361575 TBC1D10CQ8IV04 446 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 FAM133AQ8N9E0 248 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 NFAM1Q8NET5 270 aaPredicted RBP4.11□□□□□ -1.75
RPL39-201ENST00000361575 SSC4DQ8WTU2 575 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 ZNF606Q8WXB4 792 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 ATXN7L3BQ96GX2 97 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 TNFRSF13CQ96RJ3 184 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 USP28Q96RU2 1077 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 GPA33Q99795 319 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 TPPP3Q9BW30 176 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 ALG9Q9H6U8 611 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 DCTPP1Q9H773 170 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 KCNK13Q9HB14 408 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 NMUR1Q9HB89 426 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 NRN1Q9NPD7 142 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 AATFQ9NY61 560 aaKnown RBP eCLIP4.11□□□□□ -1.757e-46■■□□□ 13.1
RPL39-201ENST00000361575 RDH8Q9NYR8 311 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 MBD2Q9UBB5 411 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 NIP7Q9Y221 180 aaKnown RBP eCLIP4.11□□□□□ -1.75
RPL39-201ENST00000361575 A0A0A6YYD4 124 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 NEDD8-MDP1E9PL57 170 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 K7EQG2 157 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 FBP2O00757 339 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 CHRNA1P02708 482 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 THRBP10828 461 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 EPB41P11171 864 aaKnown RBP4.1□□□□□ -1.75
RPL39-201ENST00000361575 FOSL2P15408 326 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 CD1DP15813 335 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 HNRNPA2B1P22626 353 aaKnown RBP4.1□□□□□ -1.75
RPL39-201ENST00000361575 DPP4P27487 766 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 RFC2P35250 354 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 GSCP56915 257 aaPredicted RBP4.1□□□□□ -1.75
RPL39-201ENST00000361575 HNRNPA0Q13151 305 aaKnown RBP4.1□□□□□ -1.75
RPL39-201ENST00000361575 SNTB2Q13425 540 aaKnown RBP4.1□□□□□ -1.75
RPL39-201ENST00000361575 KIAA0141Q14154 515 aaPredicted RBP4.1□□□□□ -1.75
RPL39-201ENST00000361575 TRIP10Q15642 601 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 RUSC1-AS1Q66K80 236 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 ASPHD2Q6ICH7 369 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 NIPAL3Q6P499 406 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 CBLN3Q6UW01 205 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 GPBP1Q86WP2 473 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 CENPLQ8N0S6 344 aaPredicted RBP4.1□□□□□ -1.75
RPL39-201ENST00000361575 AQP11Q8NBQ7 271 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 STKLD1Q8NE28 680 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.1□□□□□ -1.75
RPL39-201ENST00000361575 THRSPQ92748 146 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 ADIPOR1Q96A54 375 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 NABP1Q96AH0 204 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 CASD1Q96PB1 797 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 RCHY1Q96PM5 261 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 PARLQ9H300 379 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 RIBC2Q9H4K1 309 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 Q9HAA7 133 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 WDR41Q9HAD4 459 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 B3GAT2Q9NPZ5 323 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 AGPAT5Q9NUQ2 364 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 ZNF446Q9NWS9 450 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 GPR83Q9NYM4 423 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 TUBGCP4Q9UGJ1 667 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 DUSP12Q9UNI6 340 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 GAB2Q9UQC2 676 aa4.1□□□□□ -1.75
RPL39-201ENST00000361575 WASHC1A8K0Z3 465 aa4.09□□□□□ -1.75
RPL39-201ENST00000361575 WASH3PC4AMC7 463 aa4.09□□□□□ -1.75
RPL39-201ENST00000361575 PRSS44E7EML9 344 aa4.09□□□□□ -1.75
RPL39-201ENST00000361575 DUSP11O75319 330 aaKnown RBP4.09□□□□□ -1.75
RPL39-201ENST00000361575 FRAT2O75474 233 aaPredicted RBP4.09□□□□□ -1.75
RPL39-201ENST00000361575 SPAG6O75602 509 aa4.09□□□□□ -1.75
RPL39-201ENST00000361575 IGHG3P01860 377 aa4.09□□□□□ -1.75
RPL39-201ENST00000361575 IQCF3P0C7M6 154 aa4.09□□□□□ -1.75
RPL39-201ENST00000361575 TSPAN8P19075 237 aa4.09□□□□□ -1.75
RPL39-201ENST00000361575 PGFP49763 221 aa4.09□□□□□ -1.75
RPL39-201ENST00000361575 METAP1P53582 386 aa4.09□□□□□ -1.75
RPL39-201ENST00000361575 RAG2P55895 527 aa4.09□□□□□ -1.75
RPL39-201ENST00000361575 PPIAP62937 165 aaKnown RBP4.09□□□□□ -1.75
RPL39-201ENST00000361575 EXOSC2Q13868 293 aaKnown RBP4.09□□□□□ -1.75
RPL39-201ENST00000361575 CDKN3Q16667 212 aa4.09□□□□□ -1.75
RPL39-201ENST00000361575 PARP6Q2NL67 630 aa4.09□□□□□ -1.75
RPL39-201ENST00000361575 NADK2Q4G0N4 442 aa4.09□□□□□ -1.75
RPL39-201ENST00000361575 NCR3LG1Q68D85 454 aa4.09□□□□□ -1.75
RPL39-201ENST00000361575 ZNF562Q6V9R5 426 aa4.09□□□□□ -1.75
RPL39-201ENST00000361575 WASH2PQ6VEQ5 465 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms