RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 LIMK1P53667 647 aa21.35■■□□□ 1.01
LDB1-201ENST00000361198 LIM2P55344 173 aa21.35■■□□□ 1.01
LDB1-201ENST00000361198 RAB8AP61006 207 aa21.35■■□□□ 1.01
LDB1-201ENST00000361198 TUBA3EQ6PEY2 450 aa21.35■■□□□ 1.01
LDB1-201ENST00000361198 OR5D16Q8NGK9 328 aa21.35■■□□□ 1.01
LDB1-201ENST00000361198 AMBNQ9NP70 447 aa21.35■■□□□ 1.01
LDB1-201ENST00000361198 FBXW2Q9UKT8 454 aa21.35■■□□□ 1.01
LDB1-201ENST00000361198 GADD45GO95257 159 aa21.34■■□□□ 1.01
LDB1-201ENST00000361198 OR12D1P0DN82 309 aa21.34■■□□□ 1.01
LDB1-201ENST00000361198 GADD45AP24522 165 aa21.34■■□□□ 1.01
LDB1-201ENST00000361198 CERS1P27544 350 aa21.34■■□□□ 1.01
LDB1-201ENST00000361198 ACTR1BP42025 376 aa21.34■■□□□ 1.01
LDB1-201ENST00000361198 MAGEA8P43361 318 aa21.34■■□□□ 1.01
LDB1-201ENST00000361198 TPMTP51580 245 aa21.34■■□□□ 1.01
LDB1-201ENST00000361198 ACTR1AP61163 376 aa21.34■■□□□ 1.01
LDB1-201ENST00000361198 MRPS21P82921 87 aaKnown RBP21.34■■□□□ 1.01
LDB1-201ENST00000361198 ZNF750Q32MQ0 723 aa21.34■■□□□ 1.01
LDB1-201ENST00000361198 INAVAQ3KP66 663 aa21.34■■□□□ 1.01
LDB1-201ENST00000361198 TBC1D19Q8N5T2 526 aa21.34■■□□□ 1.01
LDB1-201ENST00000361198 MFSD9Q8NBP5 474 aa21.34■■□□□ 1.01
LDB1-201ENST00000361198 COL21A1Q96P44 957 aa21.34■■□□□ 1.01
LDB1-201ENST00000361198 FCRL4Q96PJ5 515 aa21.34■■□□□ 1.01
LDB1-201ENST00000361198 GDF15Q99988 308 aa21.34■■□□□ 1.01
LDB1-201ENST00000361198 NXF2Q9GZY0 626 aaKnown RBP21.34■■□□□ 1.01
LDB1-201ENST00000361198 SCN3AQ9NY46 2000 aa21.34■■□□□ 1.01
LDB1-201ENST00000361198 KLF15Q9UIH9 416 aa21.34■■□□□ 1.01
LDB1-201ENST00000361198 BTN3A3O00478 584 aa21.34■■□□□ 1.01
LDB1-201ENST00000361198 FFAR1O14842 300 aa21.34■■□□□ 1.01
LDB1-201ENST00000361198 ALPPL2P10696 532 aa21.34■■□□□ 1.01
LDB1-201ENST00000361198 HNRNPA2B1P22626 353 aaKnown RBP21.34■■□□□ 1.01
LDB1-201ENST00000361198 DNASE1L3Q13609 305 aa21.34■■□□□ 1.01
LDB1-201ENST00000361198 SYPL1Q16563 259 aa21.34■■□□□ 1.01
LDB1-201ENST00000361198 C18orf63Q68DL7 685 aa21.34■■□□□ 1.01
LDB1-201ENST00000361198 USP43Q70EL4 1123 aa21.34■■□□□ 1.01
LDB1-201ENST00000361198 ZNF675Q8TD23 568 aa21.34■■□□□ 1.01
LDB1-201ENST00000361198 CNRIP1Q96F85 164 aaPredicted RBP21.34■■□□□ 1.01
LDB1-201ENST00000361198 BBS4Q96RK4 519 aa21.34■■□□□ 1.01
LDB1-201ENST00000361198 OR51I1Q9H343 314 aa21.34■■□□□ 1.01
LDB1-201ENST00000361198 ZCCHC3Q9NUD5 404 aaKnown RBP21.34■■□□□ 1.01
LDB1-201ENST00000361198 SNX7Q9UNH6 387 aa21.34■■□□□ 1.01
LDB1-201ENST00000361198 ISPDA4D126 451 aa21.33■■□□□ 1.01
LDB1-201ENST00000361198 TAF4O00268 1085 aa21.33■■□□□ 1.01
LDB1-201ENST00000361198 NARSO43776 548 aaKnown RBP21.33■■□□□ 1.01
LDB1-201ENST00000361198 AIFM1O95831 613 aa21.33■■□□□ 1.01
LDB1-201ENST00000361198 POU2F1P14859 743 aa21.33■■□□□ 1.01
LDB1-201ENST00000361198 IDH2P48735 452 aaKnown RBP21.33■■□□□ 1.01
LDB1-201ENST00000361198 DUSP2Q05923 314 aa21.33■■□□□ 1.01
LDB1-201ENST00000361198 IRF3Q14653 427 aa21.33■■□□□ 1.01
LDB1-201ENST00000361198 TRIM69Q86WT6 500 aa21.33■■□□□ 1.01
LDB1-201ENST00000361198 SMRP1Q8NCR6 262 aa21.33■■□□□ 1.01
LDB1-201ENST00000361198 XAGE5Q8WWM1 108 aa21.33■■□□□ 1.01
LDB1-201ENST00000361198 SLC35G5Q96KT7 338 aa21.33■■□□□ 1.01
LDB1-201ENST00000361198 COL4A2P08572 1712 aa21.33■■□□□ 1
LDB1-201ENST00000361198 A0A1W2PS29 197 aa21.32■■□□□ 1
LDB1-201ENST00000361198 NDUFS1P28331 727 aa21.32■■□□□ 1
LDB1-201ENST00000361198 NTSP30990 170 aa21.32■■□□□ 1
LDB1-201ENST00000361198 CD300CQ08708 224 aa21.32■■□□□ 1
LDB1-201ENST00000361198 GPR19Q15760 415 aa21.32■■□□□ 1
LDB1-201ENST00000361198 TJAP1Q5JTD0 557 aa21.32■■□□□ 1
LDB1-201ENST00000361198 SUN3Q8TAQ9 357 aa21.32■■□□□ 1
LDB1-201ENST00000361198 OTUB1Q96FW1 271 aaPredicted RBP21.32■■□□□ 1
LDB1-201ENST00000361198 TREX2Q9BQ50 279 aaPredicted RBP21.32■■□□□ 1
LDB1-201ENST00000361198 GPR83Q9NYM4 423 aa21.32■■□□□ 1
LDB1-201ENST00000361198 PCOLCE2Q9UKZ9 415 aa21.32■■□□□ 1
LDB1-201ENST00000361198 HCN4Q9Y3Q4 1203 aa21.32■■□□□ 1
LDB1-201ENST00000361198 UGT2A1Q9Y4X1 527 aa21.32■■□□□ 1
LDB1-201ENST00000361198 SLC28A2O43868 658 aa21.32■■□□□ 1
LDB1-201ENST00000361198 SEMA7AO75326 666 aa21.32■■□□□ 1
LDB1-201ENST00000361198 UPK1BO75841 260 aa21.32■■□□□ 1
LDB1-201ENST00000361198 RASGRP1O95267 797 aa21.32■■□□□ 1
LDB1-201ENST00000361198 APBB3O95704 486 aa21.32■■□□□ 1
LDB1-201ENST00000361198 RPLP0P05388 317 aaKnown RBP21.32■■□□□ 1
LDB1-201ENST00000361198 ASGR2P07307 311 aa21.32■■□□□ 1
LDB1-201ENST00000361198 STSP08842 583 aa21.32■■□□□ 1
LDB1-201ENST00000361198 C8orf89P0DMQ9 161 aa21.32■■□□□ 1
LDB1-201ENST00000361198 ADORA3P0DMS8 318 aa21.32■■□□□ 1
LDB1-201ENST00000361198 PAQR7Q86WK9 346 aa21.32■■□□□ 1
LDB1-201ENST00000361198 CCDC116Q8IYX3 515 aa21.32■■□□□ 1
LDB1-201ENST00000361198 SRMSQ9H3Y6 488 aa21.32■■□□□ 1
LDB1-201ENST00000361198 KCND3Q9UK17 655 aa21.32■■□□□ 1
LDB1-201ENST00000361198 FANCMQ8IYD8 2048 aa21.32■■□□□ 1
LDB1-201ENST00000361198 TRIOO75962 3097 aa21.32■■□□□ 1
LDB1-201ENST00000361198 AGAP5A6NIR3 686 aa21.31■■□□□ 1
LDB1-201ENST00000361198 AQP9O43315 295 aa21.31■■□□□ 1
LDB1-201ENST00000361198 PDE9AO76083 593 aa21.31■■□□□ 1
LDB1-201ENST00000361198 PRKAG1P54619 331 aa21.31■■□□□ 1
LDB1-201ENST00000361198 CDC20Q12834 499 aa21.31■■□□□ 1
LDB1-201ENST00000361198 VN1R4Q7Z5H5 301 aa21.31■■□□□ 1
LDB1-201ENST00000361198 SLC22A16Q86VW1 577 aa21.31■■□□□ 1
LDB1-201ENST00000361198 AMER2Q8N7J2 671 aa21.31■■□□□ 1
LDB1-201ENST00000361198 KCT2Q8NC54 265 aa21.31■■□□□ 1
LDB1-201ENST00000361198 GTPBP3Q969Y2 492 aaKnown RBP21.31■■□□□ 1
LDB1-201ENST00000361198 WFDC6Q9BQY6 131 aa21.31■■□□□ 1
LDB1-201ENST00000361198 ZNF556Q9HAH1 456 aa21.31■■□□□ 1
LDB1-201ENST00000361198 P2RX2Q9UBL9 471 aa21.31■■□□□ 1
LDB1-201ENST00000361198 TRPC4Q9UBN4 977 aa21.31■■□□□ 1
LDB1-201ENST00000361198 CD207Q9UJ71 328 aa21.31■■□□□ 1
LDB1-201ENST00000361198 CES1P1Q9UKY3 287 aa21.31■■□□□ 1
LDB1-201ENST00000361198 PCDHGA3Q9Y5H0 932 aa21.31■■□□□ 1
LDB1-201ENST00000361198 TCRBV21S2A2A0A5A6 115 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms