RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 OR4M2Q8NGB6 313 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 G6PC3Q9BUM1 346 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 POTEKPQ9BYX7 375 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 ACTR6Q9GZN1 396 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 FZD8Q9H461 694 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 ARPC5O15511 151 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 CAPNS1P04632 268 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 ZNF30P17039 623 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 CD53P19397 219 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 PRKCZQ05513 592 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 POU4F3Q15319 338 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 ZNF776Q68DI1 518 aaPredicted RBP15.33■□□□□ 0.04
COL18A1-203ENST00000359759 PLBD1Q6P4A8 553 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 BAIAP2L2Q6UXY1 529 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 LBX2Q6XYB7 198 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 SERTAD4Q9NUC0 356 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 SCML2Q9UQR0 700 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 FAM227AF5H4B4 570 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 LILRB5O75023 590 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 SOX3P41225 446 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 ACTC1P68032 377 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 ACTA1P68133 377 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 SRYQ05066 204 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 PAFAH1B3Q15102 231 aaKnown RBP15.33■□□□□ 0.04
COL18A1-203ENST00000359759 TIFABQ6ZNK6 161 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 GRASPQ7Z6J2 395 aaPredicted RBP15.33■□□□□ 0.04
COL18A1-203ENST00000359759 ENDOVQ8N8Q3 282 aaKnown RBP15.33■□□□□ 0.04
COL18A1-203ENST00000359759 OR8J3Q8NGG0 315 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 NPRL2Q8WTW4 380 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 TSPEARQ8WU66 669 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 GIMAP5Q96F15 307 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 PTCHD1Q96NR3 888 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 ZBTB20Q9HC78 741 aaPredicted RBP15.33■□□□□ 0.04
COL18A1-203ENST00000359759 GPATCH2Q9NW75 528 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 CIB4A0PJX0 185 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 ZNF705GA8MUZ8 300 aaPredicted RBP15.33■□□□□ 0.04
COL18A1-203ENST00000359759 AGTR1P30556 359 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 PBX2P40425 430 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 POLR2HP52434 150 aaKnown RBP15.33■□□□□ 0.04
COL18A1-203ENST00000359759 TSPAN33Q86UF1 283 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 OSTM1Q86WC4 334 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 FNDC8Q8TC99 324 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 OR14A2Q96R54 314 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 HHLA1C9JL84 531 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 NUPL2O15504 423 aaKnown RBP15.32■□□□□ 0.04
COL18A1-203ENST00000359759 GMPRP36959 345 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 SCNN1AP37088 669 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 C18orf21Q32NC0 220 aaPredicted RBP15.32■□□□□ 0.04
COL18A1-203ENST00000359759 TPGS2Q68CL5 300 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 OR5P2Q8WZ92 322 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 MRM3Q9HC36 420 aaKnown RBP15.32■□□□□ 0.04
COL18A1-203ENST00000359759 POLR1CO15160 346 aaPredicted RBP15.32■□□□□ 0.04
COL18A1-203ENST00000359759 ZNF791Q3KP31 576 aaPredicted RBP15.32■□□□□ 0.04
COL18A1-203ENST00000359759 ATG9BQ674R7 924 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 GPR149Q86SP6 731 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 TMPRSS11EQ9UL52 423 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 ARGFXA6NJG6 315 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 GMDSO60547 372 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 ASGR2P07307 311 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 PLCXD2Q0VAA5 305 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 PCGF3Q3KNV8 242 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 FAM69BQ5VUD6 431 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 OR4K13Q8NH42 304 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 MOAP1Q96BY2 351 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 ARL5BQ96KC2 179 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 LHPPQ9H008 270 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 RAC2P15153 192 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 SSTR4P31391 388 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 ACTA2P62736 377 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 ACTG2P63267 376 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 NPRL3Q12980 569 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 SPATS1Q496A3 300 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 OR4N5Q8IXE1 308 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 SLCO2A1Q92959 643 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 PTERQ96BW5 349 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 CAPNS2Q96L46 248 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 SMOC2Q9H3U7 446 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 CYP8B1Q9UNU6 501 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 OARD1Q9Y530 152 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 GGT3PA6NGU5 568 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 RAB3BP20337 219 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 FGFBP1Q14512 234 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 PLGLAQ15195 96 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 RPS26P11Q5JNZ5 115 aaPredicted RBP15.32■□□□□ 0.04
COL18A1-203ENST00000359759 ERN2Q76MJ5 926 aaKnown RBP15.32■□□□□ 0.04
COL18A1-203ENST00000359759 CELF5Q8N6W0 485 aaKnown RBP15.32■□□□□ 0.04
COL18A1-203ENST00000359759 ZFAND2BQ8WV99 257 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 TCTEX1D2Q8WW35 142 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 SPRYD4Q8WW59 207 aaPredicted RBP15.32■□□□□ 0.04
COL18A1-203ENST00000359759 ST6GALNAC5Q9BVH7 336 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 SH3BGRL2Q9UJC5 107 aa15.32■□□□□ 0.04
COL18A1-203ENST00000359759 MITFO75030 526 aaPredicted RBP15.31■□□□□ 0.04
COL18A1-203ENST00000359759 SERPINA7P05543 415 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 SYN1P17600 705 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 C14orf80Q86SX3 495 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 ZNF619Q8N2I2 560 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 OR51T1Q8NGJ9 327 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 PLEKHO2Q8TD55 490 aa15.31■□□□□ 0.04
COL18A1-203ENST00000359759 PAPOLGQ9BWT3 736 aaKnown RBP15.31■□□□□ 0.04
COL18A1-203ENST00000359759 HAO2Q9NYQ3 351 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms