RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 FAM160A2Q8N612 972 aaPredicted RBP17.61■□□□□ 0.41
SNX11-201ENST00000359238 ANKRD53Q8N9V6 530 aa17.61■□□□□ 0.41
SNX11-201ENST00000359238 WDR34Q96EX3 536 aa17.61■□□□□ 0.41
SNX11-201ENST00000359238 TOE1Q96GM8 510 aaKnown RBP17.61■□□□□ 0.41
SNX11-201ENST00000359238 HRASLS5Q96KN8 279 aa17.61■□□□□ 0.41
SNX11-201ENST00000359238 CPPED1Q9BRF8 314 aaPredicted RBP17.61■□□□□ 0.41
SNX11-201ENST00000359238 PCDHGA6Q9Y5G7 932 aa17.61■□□□□ 0.41
SNX11-201ENST00000359238 IGKV1-8A0A0C4DH67 115 aa17.61■□□□□ 0.41
SNX11-201ENST00000359238 A0A1W2PQ72 361 aa17.61■□□□□ 0.41
SNX11-201ENST00000359238 CLCA1A8K7I4 914 aa17.61■□□□□ 0.41
SNX11-201ENST00000359238 GPR89AB7ZAQ6 455 aa17.61■□□□□ 0.41
SNX11-201ENST00000359238 FPGTO14772 594 aa17.61■□□□□ 0.41
SNX11-201ENST00000359238 KIAA0513O60268 411 aa17.61■□□□□ 0.41
SNX11-201ENST00000359238 STATHP02808 62 aa17.61■□□□□ 0.41
SNX11-201ENST00000359238 GPR89BP0CG08 455 aa17.61■□□□□ 0.41
SNX11-201ENST00000359238 HNRNPA2B1P22626 353 aaKnown RBP17.61■□□□□ 0.41
SNX11-201ENST00000359238 KELP23276 732 aa17.61■□□□□ 0.41
SNX11-201ENST00000359238 MLLT3P42568 568 aaPredicted RBP17.61■□□□□ 0.41
SNX11-201ENST00000359238 MC1RQ01726 317 aa17.61■□□□□ 0.41
SNX11-201ENST00000359238 FZD5Q13467 585 aa17.61■□□□□ 0.41
SNX11-201ENST00000359238 FAM180BQ6P0A1 224 aa17.61■□□□□ 0.41
SNX11-201ENST00000359238 FAHD1Q6P587 224 aa17.61■□□□□ 0.41
SNX11-201ENST00000359238 ENPP7Q6UWV6 458 aa17.61■□□□□ 0.41
SNX11-201ENST00000359238 ATG16L2Q8NAA4 619 aa17.61■□□□□ 0.41
SNX11-201ENST00000359238 TSTD1Q8NFU3 115 aa17.61■□□□□ 0.41
SNX11-201ENST00000359238 DNAJB8Q8NHS0 232 aa17.61■□□□□ 0.41
SNX11-201ENST00000359238 CHTF18Q8WVB6 975 aa17.61■□□□□ 0.41
SNX11-201ENST00000359238 GGHQ92820 318 aa17.61■□□□□ 0.41
SNX11-201ENST00000359238 SNAPC3Q92966 411 aa17.61■□□□□ 0.41
SNX11-201ENST00000359238 COL21A1Q96P44 957 aa17.61■□□□□ 0.41
SNX11-201ENST00000359238 KCNS3Q9BQ31 491 aa17.61■□□□□ 0.41
SNX11-201ENST00000359238 SYNPO2LQ9H987 977 aa17.61■□□□□ 0.41
SNX11-201ENST00000359238 DMRT3Q9NQL9 472 aa17.61■□□□□ 0.41
SNX11-201ENST00000359238 NUFIP1Q9UHK0 495 aaKnown RBP17.61■□□□□ 0.41
SNX11-201ENST00000359238 TRBV23OR9-2A0A075B6M9 112 aa17.6■□□□□ 0.41
SNX11-201ENST00000359238 PRSS38A1L453 326 aa17.6■□□□□ 0.41
SNX11-201ENST00000359238 FAM170BA6NMN3 283 aa17.6■□□□□ 0.41
SNX11-201ENST00000359238 H7BY64 318 aa17.6■□□□□ 0.41
SNX11-201ENST00000359238 SCN2BO60939 215 aa17.6■□□□□ 0.41
SNX11-201ENST00000359238 ADORA3P0DMS8 318 aa17.6■□□□□ 0.41
SNX11-201ENST00000359238 LAMP1P11279 417 aa17.6■□□□□ 0.41
SNX11-201ENST00000359238 PRPS2P11908 318 aa17.6■□□□□ 0.41
SNX11-201ENST00000359238 ACSM2AQ08AH3 577 aa17.6■□□□□ 0.41
SNX11-201ENST00000359238 PRSS53Q2L4Q9 553 aa17.6■□□□□ 0.41
SNX11-201ENST00000359238 ACSM2BQ68CK6 577 aa17.6■□□□□ 0.41
SNX11-201ENST00000359238 SLC51BQ86UW2 128 aa17.6■□□□□ 0.41
SNX11-201ENST00000359238 PLCZ1Q86YW0 608 aa17.6■□□□□ 0.41
SNX11-201ENST00000359238 LAS2Q8IYD9 372 aa17.6■□□□□ 0.41
SNX11-201ENST00000359238 CRELD1Q96HD1 420 aa17.6■□□□□ 0.41
SNX11-201ENST00000359238 PRAP1Q96NZ9 151 aa17.6■□□□□ 0.41
SNX11-201ENST00000359238 SPASTQ9UBP0 616 aa17.6■□□□□ 0.41
SNX11-201ENST00000359238 TBC1D29Q9UFV1 150 aa17.6■□□□□ 0.41
SNX11-201ENST00000359238 DNMT3AQ9Y6K1 912 aaPredicted RBP17.6■□□□□ 0.41
SNX11-201ENST00000359238 MDC1Q14676 2089 aaKnown RBP17.6■□□□□ 0.41
SNX11-201ENST00000359238 LRP4O75096 1905 aa17.6■□□□□ 0.41
SNX11-201ENST00000359238 POLR2CP19387 275 aaPredicted RBP17.6■□□□□ 0.41
SNX11-201ENST00000359238 ZP2Q05996 745 aa17.6■□□□□ 0.41
SNX11-201ENST00000359238 PRPF38BQ5VTL8 546 aaKnown RBP17.6■□□□□ 0.41
SNX11-201ENST00000359238 XKRXQ6PP77 449 aa17.6■□□□□ 0.41
SNX11-201ENST00000359238 TCTE3Q8IZS6 198 aa17.6■□□□□ 0.41
SNX11-201ENST00000359238 SMURF1Q9HCE7 757 aa17.6■□□□□ 0.41
SNX11-201ENST00000359238 KLHL20Q9Y2M5 609 aa17.6■□□□□ 0.41
SNX11-201ENST00000359238 RTCAO00442 366 aaKnown RBP17.59■□□□□ 0.41
SNX11-201ENST00000359238 ARHGEF9O43307 516 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 CPNE3O75131 537 aaKnown RBP17.59■□□□□ 0.41
SNX11-201ENST00000359238 CCNDBP1O95273 360 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 ALPPP05187 535 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 S100A3P33764 101 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 FAPQ12884 760 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 TIMM50Q3ZCQ8 353 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 ZNF385BQ569K4 471 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 DEPDC4Q8N2C3 294 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 ASB12Q8WXK4 309 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 CAMK1GQ96NX5 476 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 GPR174Q9BXC1 333 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 GABARAPL3Q9BY60 117 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 BRF2Q9HAW0 419 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 MUTYHQ9UIF7 546 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 GABRR3A8MPY1 467 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 CHURC1-FNTBB4DL54 471 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 PPM1DO15297 605 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 PI15O43692 258 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 ERN1O75460 977 aaKnown RBP17.59■□□□□ 0.41
SNX11-201ENST00000359238 ZNF682O95780 498 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 IGHV4-34P06331 123 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 ANXA4P09525 319 aaPredicted RBP17.59■□□□□ 0.41
SNX11-201ENST00000359238 LRRC32Q14392 662 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 ESCO2Q56NI9 601 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 C19orf48Q6RUI8 117 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 LCTLQ6UWM7 567 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 ZNF767PQ75MW2 155 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 COMMD6Q7Z4G1 85 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 DENND6BQ8NEG7 585 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 TESCQ96BS2 214 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 MACROD1Q9BQ69 325 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 SLC22A4Q9H015 551 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 TMEM168Q9H0V1 697 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 SNX7Q9UNH6 387 aa17.59■□□□□ 0.41
SNX11-201ENST00000359238 SAMHD1Q9Y3Z3 626 aaKnown RBP17.59■□□□□ 0.41
SNX11-201ENST00000359238 V9GYH0 126 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms