RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 ATP1B2P14415 290 aaPredicted RBP9.35□□□□□ -0.91
CHD3-202ENST00000358181 LCN1P31025 176 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 GABRB2P47870 512 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 RPS14P62263 151 aaKnown RBP9.35□□□□□ -0.91
CHD3-202ENST00000358181 RNASE10Q5GAN6 216 aaKnown RBP9.35□□□□□ -0.91
CHD3-202ENST00000358181 NHSL2Q5HYW2 709 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 UEVLDQ8IX04 471 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 ZNF687Q8N1G0 1237 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 GALNT15Q8N3T1 639 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 DBF4BQ8NFT6 615 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 HSFY1Q96LI6 401 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 DPH3P1Q9H4G8 78 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 ZNF286AQ9HBT8 521 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 KCMF1Q9P0J7 381 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 WASH4PA8MWX3 477 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 AGTR1P30556 359 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 SLC6A4P31645 630 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 XCR1P46094 333 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 SMSP52788 366 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 PHC1P78364 1004 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 CHRNA6Q15825 494 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 SLC5A9Q2M3M2 681 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 DESI1Q6ICB0 168 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 SLC30A8Q8IWU4 369 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 WDR31Q8NA23 367 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 ZNF675Q8TD23 568 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 OR51B5Q9H339 312 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 VRTNQ9H8Y1 702 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 NGBQ9NPG2 151 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 VDAC3Q9Y277 283 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 MEIS3P2A8K0S8 358 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 BBIP1A8MTZ0 92 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 FAM171A2A8MVW0 826 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 F5H0A9 414 aaPredicted RBP9.35□□□□□ -0.91
CHD3-202ENST00000358181 HDAC3O15379 428 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 MAOBP27338 520 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 ARL6IP1Q15041 203 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 DUSP28Q4G0W2 176 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 OR4F3Q6IEY1 312 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 CLEC5AQ9NY25 188 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 KLHL9Q9P2J3 617 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 KLHL13Q9P2N7 655 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 MYOTQ9UBF9 498 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 SLC23A2Q9UGH3 650 aa9.35□□□□□ -0.91
CHD3-202ENST00000358181 NPIPA5A0A0B4J1W7 369 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 GJE1A6NN92 205 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 NPIPA7E9PJI5 369 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 H3BMQ9 156 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 C6orf47O95873 294 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 NPIPA8P0DM63 369 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 SEC61A1P61619 476 aaKnown RBP9.34□□□□□ -0.91
CHD3-202ENST00000358181 TMEM107Q6UX40 140 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 ZNF783Q6ZMS7 281 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 SNIP1Q8TAD8 396 aaKnown RBP9.34□□□□□ -0.91
CHD3-202ENST00000358181 BADQ92934 168 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 TSSK6Q9BXA6 273 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 H1F0P07305 194 aaKnown RBP9.34□□□□□ -0.91
CHD3-202ENST00000358181 GSTP1P09211 210 aaKnown RBP9.34□□□□□ -0.91
CHD3-202ENST00000358181 APEHP13798 732 aaKnown RBP9.34□□□□□ -0.91
CHD3-202ENST00000358181 NFYBP25208 207 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 NR1H2P55055 460 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 SPRYD7Q5W111 196 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 KIAA1958Q8N8K9 716 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 OR56A1Q8NGH5 318 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 FOXN4Q96NZ1 517 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 NARFLQ9H6Q4 476 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 FNIP2Q9P278 1114 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 FAM96BQ9Y3D0 163 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 ADAMTS4O75173 837 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 AGR2O95994 175 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 G6PDP11413 515 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 KITLGP21583 273 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 CSNK2A1P68400 391 aaPredicted RBP9.34□□□□□ -0.91
CHD3-202ENST00000358181 HMGCS1Q01581 520 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 EXOSC6Q5RKV6 272 aaKnown RBP9.34□□□□□ -0.91
CHD3-202ENST00000358181 PRELID2Q8N945 189 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 CSNK2A3Q8NEV1 391 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 OR5H2Q8NGV7 314 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 TMEM109Q9BVC6 243 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 BOCQ9BWV1 1114 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 SLC22A4Q9H015 551 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 L2HGDHQ9H9P8 463 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 SDHAF2Q9NX18 166 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 P4HTMQ9NXG6 502 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 GPR160Q9UJ42 338 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 PCDHGA1Q9Y5H4 931 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 ACTL7AQ9Y615 435 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 MICAL3Q7RTP6 2002 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 CD300LBA8K4G0 201 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 PDLIM1O00151 329 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 SLC19A2O60779 497 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 CLDN7O95471 211 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 PAK4O96013 591 aaPredicted RBP9.34□□□□□ -0.91
CHD3-202ENST00000358181 CD1BP29016 333 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 GBX1Q14549 363 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 BORAQ6PGQ7 559 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 MOB3CQ70IA8 216 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 OR4N2Q8NGD1 307 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 MROQ9BYG7 248 aa9.34□□□□□ -0.91
CHD3-202ENST00000358181 NKX1-2Q9UD57 310 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms