RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 RIF1Q5UIP0 2472 aaKnown RBP16.99■□□□□ 0.31
SMARCD3-202ENST00000356800 B4E171 279 aa16.99■□□□□ 0.31
SMARCD3-202ENST00000356800 UPK1AO00322 258 aa16.99■□□□□ 0.31
SMARCD3-202ENST00000356800 PLOD2O00469 737 aa16.99■□□□□ 0.31
SMARCD3-202ENST00000356800 CASQ2O14958 399 aaPredicted RBP16.99■□□□□ 0.31
SMARCD3-202ENST00000356800 CREG1O75629 220 aa16.99■□□□□ 0.31
SMARCD3-202ENST00000356800 SLC35E2P0CK97 266 aa16.99■□□□□ 0.31
SMARCD3-202ENST00000356800 ZNF28P17035 718 aa16.99■□□□□ 0.31
SMARCD3-202ENST00000356800 RORAP35398 523 aa16.99■□□□□ 0.31
SMARCD3-202ENST00000356800 TSPAN7P41732 249 aa16.99■□□□□ 0.31
SMARCD3-202ENST00000356800 VWA2Q5GFL6 755 aa16.99■□□□□ 0.31
SMARCD3-202ENST00000356800 FHL5Q5TD97 284 aa16.99■□□□□ 0.31
SMARCD3-202ENST00000356800 FAM111BQ6SJ93 734 aa16.99■□□□□ 0.31
SMARCD3-202ENST00000356800 HORMAD2Q8N7B1 307 aa16.99■□□□□ 0.31
SMARCD3-202ENST00000356800 PAPD5Q8NDF8 572 aaKnown RBP16.99■□□□□ 0.31
SMARCD3-202ENST00000356800 CMKLR1Q99788 373 aa16.99■□□□□ 0.31
SMARCD3-202ENST00000356800 ALOXE3Q9BYJ1 711 aa16.99■□□□□ 0.31
SMARCD3-202ENST00000356800 NTMQ9P121 344 aa16.99■□□□□ 0.31
SMARCD3-202ENST00000356800 CTSFQ9UBX1 484 aa16.99■□□□□ 0.31
SMARCD3-202ENST00000356800 ANAPC2Q9UJX6 822 aa16.99■□□□□ 0.31
SMARCD3-202ENST00000356800 PMS2P1A4D2B8 440 aa16.98■□□□□ 0.31
SMARCD3-202ENST00000356800 EMC8O43402 210 aa16.98■□□□□ 0.31
SMARCD3-202ENST00000356800 CSO75390 466 aaKnown RBP16.98■□□□□ 0.31
SMARCD3-202ENST00000356800 CT62P0C5K7 136 aa16.98■□□□□ 0.31
SMARCD3-202ENST00000356800 BMP2P12643 396 aa16.98■□□□□ 0.31
SMARCD3-202ENST00000356800 ITIH1P19827 911 aa16.98■□□□□ 0.31
SMARCD3-202ENST00000356800 IL10P22301 178 aa16.98■□□□□ 0.31
SMARCD3-202ENST00000356800 VHLP40337 213 aa16.98■□□□□ 0.31
SMARCD3-202ENST00000356800 ETV5P41161 510 aa16.98■□□□□ 0.31
SMARCD3-202ENST00000356800 STX4Q12846 297 aa16.98■□□□□ 0.31
SMARCD3-202ENST00000356800 PRICKLE4Q2TBC4 344 aa16.98■□□□□ 0.31
SMARCD3-202ENST00000356800 NKAIN1Q4KMZ8 207 aa16.98■□□□□ 0.31
SMARCD3-202ENST00000356800 TRMT12Q53H54 448 aaKnown RBP16.98■□□□□ 0.31
SMARCD3-202ENST00000356800 TNFAIP8L2Q6P589 184 aaPredicted RBP16.98■□□□□ 0.31
SMARCD3-202ENST00000356800 SZRD1Q7Z422 152 aa16.98■□□□□ 0.31
SMARCD3-202ENST00000356800 MAL2Q969L2 176 aa16.98■□□□□ 0.31
SMARCD3-202ENST00000356800 TMEM38AQ9H6F2 299 aa16.98■□□□□ 0.31
SMARCD3-202ENST00000356800 MKKSQ9NPJ1 570 aaPredicted RBP16.98■□□□□ 0.31
SMARCD3-202ENST00000356800 DCAF13Q9NV06 445 aaKnown RBP16.98■□□□□ 0.31
SMARCD3-202ENST00000356800 OLAHQ9NV23 265 aa16.98■□□□□ 0.31
SMARCD3-202ENST00000356800 SLC39A1Q9NY26 324 aa16.98■□□□□ 0.31
SMARCD3-202ENST00000356800 MAT2BQ9NZL9 334 aa16.98■□□□□ 0.31
SMARCD3-202ENST00000356800 RIMS3Q9UJD0 308 aa16.98■□□□□ 0.31
SMARCD3-202ENST00000356800 LOXL2Q9Y4K0 774 aa16.98■□□□□ 0.31
SMARCD3-202ENST00000356800 DMXL1Q9Y485 3027 aa16.98■□□□□ 0.31
SMARCD3-202ENST00000356800 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 NME6O75414 186 aaPredicted RBP16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 ONECUT2O95948 504 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 MT-CO3P00414 261 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 HBQ1P09105 142 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 NT5EP21589 574 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 MAGEA8P43361 318 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 PRKAG1P54619 331 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 RHAGQ02094 409 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 EEF1A2Q05639 463 aaKnown RBP16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 RBBP4Q09028 425 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 LCN10Q6JVE6 187 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 TMEM151BQ8IW70 566 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 LILRA2Q8N149 483 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 OR2L13Q8N349 312 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 C11orf65Q8NCR3 313 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 NUP43Q8NFH3 380 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 OR56A1Q8NGH5 318 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 ZNF675Q8TD23 568 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 NETO1Q8TDF5 533 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 FAM162AQ96A26 154 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 MOAP1Q96BY2 351 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 CTHRC1Q96CG8 243 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 GIMAP5Q96F15 307 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 SLC35G5Q96KT7 338 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 STRADBQ9C0K7 418 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 C3orf14Q9HBI5 128 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 FAF1Q9UNN5 650 aaPredicted RBP16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 MMACHCQ9Y4U1 282 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 IGLV3-12A0A075B6K2 115 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 IGKV3D-11A0A0A0MRZ8 115 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 A0A1W2PNU3 283 aaPredicted RBP16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 HNRNPRO43390 633 aaKnown RBP16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 CPNE3O75131 537 aaKnown RBP16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 DKK1O94907 266 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 HMGN2P05204 90 aaKnown RBP16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 HOXB6P17509 224 aaKnown RBP16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 PCGF2P35227 344 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 LIMK1P53667 647 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 FOXL2P58012 376 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 DCDP81605 110 aaKnown RBP16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 PRR5P85299 388 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 TBCELQ5QJ74 424 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 GCNT6Q5T4J0 391 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 CEACAM20Q6UY09 585 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 QSOX2Q6ZRP7 698 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 LAPTM4BQ86VI4 370 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 ST13P4Q8IZP2 240 aaPredicted RBP16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 EID3Q8N140 333 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 TSLPQ969D9 159 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 NCLNQ969V3 563 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 C16orf58Q96GQ5 468 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 LIN37Q96GY3 246 aaPredicted RBP16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 PTCHD1Q96NR3 888 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 PKP2Q99959 881 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms