RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 LAMA5O15230 3695 aa14.47□□□□□ -0.09
TRIM13-201ENST00000356017 ANKRD11Q6UB99 2663 aaPredicted RBP14.47□□□□□ -0.09
TRIM13-201ENST00000356017 TPRP12270 2363 aaKnown RBP14.46□□□□□ -0.09
TRIM13-201ENST00000356017 TRBV11-1A0A0K0K1C0 115 aa14.46□□□□□ -0.09
TRIM13-201ENST00000356017 CFLARO15519 480 aa14.46□□□□□ -0.09
TRIM13-201ENST00000356017 CEACAM4O75871 244 aa14.46□□□□□ -0.09
TRIM13-201ENST00000356017 ZFAND5O76080 213 aa14.46□□□□□ -0.09
TRIM13-201ENST00000356017 ALPPP05187 535 aa14.46□□□□□ -0.09
TRIM13-201ENST00000356017 ITGAMP11215 1152 aa14.46□□□□□ -0.09
TRIM13-201ENST00000356017 S1PR1P21453 382 aa14.46□□□□□ -0.09
TRIM13-201ENST00000356017 SLC37A1P57057 533 aa14.46□□□□□ -0.09
TRIM13-201ENST00000356017 MRPS35P82673 323 aaKnown RBP14.46□□□□□ -0.09
TRIM13-201ENST00000356017 RCAN2Q14206 197 aa14.46□□□□□ -0.09
TRIM13-201ENST00000356017 TRMT12Q53H54 448 aaKnown RBP14.46□□□□□ -0.09
TRIM13-201ENST00000356017 AGAP7PQ5VUJ5 663 aa14.46□□□□□ -0.09
TRIM13-201ENST00000356017 FAM111BQ6SJ93 734 aa14.46□□□□□ -0.09
TRIM13-201ENST00000356017 MSANTD1Q6ZTZ1 278 aa14.46□□□□□ -0.09
TRIM13-201ENST00000356017 SLC29A4Q7RTT9 530 aa14.46□□□□□ -0.09
TRIM13-201ENST00000356017 SLC5A8Q8N695 610 aa14.46□□□□□ -0.09
TRIM13-201ENST00000356017 OR9I1Q8NGQ6 314 aa14.46□□□□□ -0.09
TRIM13-201ENST00000356017 PSMA8Q8TAA3 256 aa14.46□□□□□ -0.09
TRIM13-201ENST00000356017 KAT2AQ92830 837 aa14.46□□□□□ -0.09
TRIM13-201ENST00000356017 EXTL1Q92935 676 aa14.46□□□□□ -0.09
TRIM13-201ENST00000356017 ELP4Q96EB1 424 aa14.46□□□□□ -0.09
TRIM13-201ENST00000356017 CRELD1Q96HD1 420 aa14.46□□□□□ -0.09
TRIM13-201ENST00000356017 AGAP4Q96P64 663 aa14.46□□□□□ -0.09
TRIM13-201ENST00000356017 ARHGAP9Q9BRR9 750 aa14.46□□□□□ -0.09
TRIM13-201ENST00000356017 NUDT9Q9BW91 350 aa14.46□□□□□ -0.09
TRIM13-201ENST00000356017 RMND5AQ9H871 391 aa14.46□□□□□ -0.09
TRIM13-201ENST00000356017 C3orf14Q9HBI5 128 aa14.46□□□□□ -0.09
TRIM13-201ENST00000356017 DDX18Q9NVP1 670 aaKnown RBP14.46□□□□□ -0.09
TRIM13-201ENST00000356017 GPR83Q9NYM4 423 aa14.46□□□□□ -0.09
TRIM13-201ENST00000356017 PCSK5Q92824 1860 aa14.46□□□□□ -0.09
TRIM13-201ENST00000356017 A6NL46 340 aa14.45□□□□□ -0.1
TRIM13-201ENST00000356017 MKRN2OSH3BPM6 223 aa14.45□□□□□ -0.1
TRIM13-201ENST00000356017 HRKO00198 91 aa14.45□□□□□ -0.1
TRIM13-201ENST00000356017 SLC22A2O15244 555 aa14.45□□□□□ -0.1
TRIM13-201ENST00000356017 PRAMEF2O60811 474 aa14.45□□□□□ -0.1
TRIM13-201ENST00000356017 SCN2BO60939 215 aa14.45□□□□□ -0.1
TRIM13-201ENST00000356017 DNAJB5O75953 348 aa14.45□□□□□ -0.1
TRIM13-201ENST00000356017 CELA2AP08217 269 aa14.45□□□□□ -0.1
TRIM13-201ENST00000356017 SSTR4P31391 388 aa14.45□□□□□ -0.1
TRIM13-201ENST00000356017 DGKQP52824 942 aa14.45□□□□□ -0.1
TRIM13-201ENST00000356017 WNT3P56703 355 aa14.45□□□□□ -0.1
TRIM13-201ENST00000356017 RNF4P78317 190 aa14.45□□□□□ -0.1
TRIM13-201ENST00000356017 AGKQ53H12 422 aa14.45□□□□□ -0.1
TRIM13-201ENST00000356017 CRB2Q5IJ48 1285 aa14.45□□□□□ -0.1
TRIM13-201ENST00000356017 GKAP1Q5VSY0 366 aaPredicted RBP14.45□□□□□ -0.1
TRIM13-201ENST00000356017 H3F3CQ6NXT2 135 aa14.45□□□□□ -0.1
TRIM13-201ENST00000356017 BLOC1S3Q6QNY0 202 aa14.45□□□□□ -0.1
TRIM13-201ENST00000356017 TMEM107Q6UX40 140 aa14.45□□□□□ -0.1
TRIM13-201ENST00000356017 OR2L13Q8N349 312 aa14.45□□□□□ -0.1
TRIM13-201ENST00000356017 BRIX1Q8TDN6 353 aaKnown RBP14.45□□□□□ -0.1
TRIM13-201ENST00000356017 TSPEARQ8WU66 669 aa14.45□□□□□ -0.1
TRIM13-201ENST00000356017 SAR1AQ9NR31 198 aa14.45□□□□□ -0.1
TRIM13-201ENST00000356017 TAS2R9Q9NYW1 312 aa14.45□□□□□ -0.1
TRIM13-201ENST00000356017 PRODH2Q9UF12 536 aa14.45□□□□□ -0.1
TRIM13-201ENST00000356017 BCAP29Q9UHQ4 241 aa14.45□□□□□ -0.1
TRIM13-201ENST00000356017 BTNL2Q9UIR0 455 aa14.45□□□□□ -0.1
TRIM13-201ENST00000356017 C19orf53Q9UNZ5 99 aaPredicted RBP14.45□□□□□ -0.1
TRIM13-201ENST00000356017 PCDHGA9Q9Y5G4 932 aaKnown RBP14.45□□□□□ -0.1
TRIM13-201ENST00000356017 CCDC154A6NI56 674 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 A8MUI8 341 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 C9JVG2 144 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 COQ9O75208 318 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 C6orf47O95873 294 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 PTGER1P34995 402 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 SOX18P35713 384 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 MC3RP41968 323 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 ZFP36L2P47974 494 aaKnown RBP14.44□□□□□ -0.1
TRIM13-201ENST00000356017 POLE2P56282 527 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 PHC1P78364 1004 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 PRR5P85299 388 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 FUNDC1Q8IVP5 155 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 LGI4Q8N135 537 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 KIF2BQ8N4N8 673 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 ZNF321PQ8N8H1 164 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 ZNF615Q8N8J6 731 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 FDCSPQ8NFU4 85 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 OR7G2Q8NG99 324 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 NUBPLQ8TB37 319 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 DOK4Q8TEW6 326 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 PSMF1Q92530 271 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 ZNF354BQ96LW1 612 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 CCDC115Q96NT0 180 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 SLC25A23Q9BV35 468 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 RYDENQ9NUL5 291 aaKnown RBP14.44□□□□□ -0.1
TRIM13-201ENST00000356017 NTMQ9P121 344 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 ZNF223Q9UK11 482 aaPredicted RBP14.44□□□□□ -0.1
TRIM13-201ENST00000356017 ARL2BPQ9Y2Y0 163 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 UPK1AO00322 258 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 CBX7O95931 251 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 EFNA1P20827 205 aaPredicted RBP14.44□□□□□ -0.1
TRIM13-201ENST00000356017 HBA1P69905 142 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 EXOSC7Q15024 291 aaKnown RBP14.44□□□□□ -0.1
TRIM13-201ENST00000356017 MAPKAPK3Q16644 382 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 MEP1AQ16819 746 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 TIGD2Q4W5G0 525 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 FHL5Q5TD97 284 aa14.44□□□□□ -0.1
TRIM13-201ENST00000356017 HLA-DQA1Q5Y7H0 255 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms