RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 FZD6O60353 706 aa12.9□□□□□ -0.34
TRIM4-203ENST00000355947 DDCP20711 480 aa12.9□□□□□ -0.34
TRIM4-203ENST00000355947 ELAVL4P26378 380 aaKnown RBP12.9□□□□□ -0.34
TRIM4-203ENST00000355947 SLC6A12P48065 614 aa12.9□□□□□ -0.34
TRIM4-203ENST00000355947 RAB14P61106 215 aa12.9□□□□□ -0.34
TRIM4-203ENST00000355947 PIAS4Q8N2W9 510 aaPredicted RBP12.9□□□□□ -0.34
TRIM4-203ENST00000355947 NANOGP1Q8N7R0 232 aa12.9□□□□□ -0.34
TRIM4-203ENST00000355947 UBTD2Q8WUN7 234 aa12.9□□□□□ -0.34
TRIM4-203ENST00000355947 SLC28A3Q9HAS3 691 aa12.9□□□□□ -0.34
TRIM4-203ENST00000355947 HOXB9P17482 250 aaPredicted RBP12.9□□□□□ -0.34
TRIM4-203ENST00000355947 MLLT3P42568 568 aaPredicted RBP12.9□□□□□ -0.34
TRIM4-203ENST00000355947 GPR4P46093 362 aa12.9□□□□□ -0.34
TRIM4-203ENST00000355947 CDH11P55287 796 aa12.9□□□□□ -0.34
TRIM4-203ENST00000355947 WNT4P56705 351 aa12.9□□□□□ -0.34
TRIM4-203ENST00000355947 RHAGQ02094 409 aa12.9□□□□□ -0.34
TRIM4-203ENST00000355947 ZNF630Q2M218 657 aaPredicted RBP12.9□□□□□ -0.34
TRIM4-203ENST00000355947 LYPLAL1Q5VWZ2 237 aa12.9□□□□□ -0.34
TRIM4-203ENST00000355947 TCTN3Q6NUS6 607 aa12.9□□□□□ -0.34
TRIM4-203ENST00000355947 HSDL2Q6YN16 418 aa12.9□□□□□ -0.34
TRIM4-203ENST00000355947 LRRTM4Q86VH4 590 aa12.9□□□□□ -0.34
TRIM4-203ENST00000355947 UCN3Q969E3 161 aa12.9□□□□□ -0.34
TRIM4-203ENST00000355947 PLA2G12AQ9BZM1 189 aa12.9□□□□□ -0.34
TRIM4-203ENST00000355947 ZDHHC4Q9NPG8 344 aa12.9□□□□□ -0.34
TRIM4-203ENST00000355947 SLAMF7Q9NQ25 335 aa12.9□□□□□ -0.34
TRIM4-203ENST00000355947 C1GALT1Q9NS00 363 aa12.9□□□□□ -0.34
TRIM4-203ENST00000355947 RDH8Q9NYR8 311 aa12.9□□□□□ -0.34
TRIM4-203ENST00000355947 GLTPQ9NZD2 209 aa12.9□□□□□ -0.34
TRIM4-203ENST00000355947 A0A0B4J203 849 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.89□□□□□ -0.35
TRIM4-203ENST00000355947 KPNA3O00505 521 aaPredicted RBP12.89□□□□□ -0.35
TRIM4-203ENST00000355947 SYN3O14994 580 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 CCND3P30281 292 aaPredicted RBP12.89□□□□□ -0.35
TRIM4-203ENST00000355947 PRSS53Q2L4Q9 553 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 SYT14P1Q58G82 188 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 LIPJQ5W064 366 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 ZNF730Q6ZMV8 503 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 HSD11B1LQ7Z5J1 315 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 ADGRD2Q7Z7M1 963 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 POP5Q969H6 163 aaKnown RBP12.89□□□□□ -0.35
TRIM4-203ENST00000355947 COL26A1Q96A83 441 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 SECISBP2Q96T21 854 aaKnown RBP12.89□□□□□ -0.35
TRIM4-203ENST00000355947 SDK1Q7Z5N4 2213 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 CACNA1IQ9P0X4 2223 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 SMAD9O15198 467 aaKnown RBP12.89□□□□□ -0.35
TRIM4-203ENST00000355947 LANCL1O43813 399 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 AKAP8O43823 692 aaKnown RBP12.89□□□□□ -0.35
TRIM4-203ENST00000355947 LALBAP00709 142 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 PROS1P07225 676 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 GABRR2P28476 465 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 FLT3LGP49771 235 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 TAS2R41P59536 307 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 FCRLBQ6BAA4 426 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 COMMD7Q86VX2 200 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 RDH10Q8IZV5 341 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 SPERTQ8NA61 448 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 PROKR2Q8NFJ6 384 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 OR4D11Q8NGI4 311 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 GANCQ8TET4 914 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 LINC01599Q8WXQ3 324 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 FAM46AQ96IP4 442 aaKnown RBP12.89□□□□□ -0.35
TRIM4-203ENST00000355947 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.89□□□□□ -0.351e-5■■■□□ 18
TRIM4-203ENST00000355947 OR51V1Q9H2C8 321 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 MED20Q9H944 212 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 NANSQ9NR45 359 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 ZCCHC3Q9NUD5 404 aaKnown RBP12.89□□□□□ -0.35
TRIM4-203ENST00000355947 FKBP14Q9NWM8 211 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 NDUFB11Q9NX14 153 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 LSM7Q9UK45 103 aaKnown RBP12.89□□□□□ -0.35
TRIM4-203ENST00000355947 EXO1Q9UQ84 846 aaKnown RBP12.89□□□□□ -0.35
TRIM4-203ENST00000355947 ASF1AQ9Y294 204 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 NTNG1Q9Y2I2 539 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 TDRD15B5MCY1 1934 aaKnown RBP12.89□□□□□ -0.35
TRIM4-203ENST00000355947 HTTP42858 3142 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 CHURC1-FNTBB4DL54 471 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 NEDD8-MDP1E9PL57 170 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 GATBO75879 557 aaKnown RBP12.89□□□□□ -0.35
TRIM4-203ENST00000355947 IGHA2P01877 340 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 CKBP12277 381 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 IMPA1P29218 277 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 ACVR1BP36896 505 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 MTNR1AP48039 350 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 CCR6P51684 374 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 AP1S2P56377 157 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 BNC1Q01954 994 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 MLLT11Q13015 90 aaPredicted RBP12.89□□□□□ -0.35
TRIM4-203ENST00000355947 LASP1Q14847 261 aaKnown RBP12.89□□□□□ -0.35
TRIM4-203ENST00000355947 MPEG1Q2M385 716 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 SPIN4Q56A73 249 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 C6orf120Q7Z4R8 191 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 DNAJB7Q7Z6W7 309 aaPredicted RBP12.89□□□□□ -0.35
TRIM4-203ENST00000355947 DDX53Q86TM3 631 aaKnown RBP12.89□□□□□ -0.35
TRIM4-203ENST00000355947 GALNT11Q8NCW6 608 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 WDR20Q8TBZ3 569 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 RAET1EQ8TD07 263 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 GCDHQ92947 438 aaPredicted RBP12.89□□□□□ -0.35
TRIM4-203ENST00000355947 ARPC5LQ9BPX5 153 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 TAPBPLQ9BX59 468 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 ATP13A2Q9NQ11 1180 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 POLHQ9Y253 713 aa12.89□□□□□ -0.35
TRIM4-203ENST00000355947 PDGFAP04085 211 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms