RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 C14orf28Q4W4Y0 310 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 SORCS1Q8WY21 1168 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 KLRG1Q96E93 195 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 C1orf74Q96LT6 269 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 ARHGAP39Q9C0H5 1083 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 CYP8B1Q9UNU6 501 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 IL1AP01583 271 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 GP1BBP13224 206 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 USP50Q70EL3 339 aaPredicted RBP12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 RXFP3Q9NSD7 469 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 ACOT7O00154 380 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 TXNL1O43396 289 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 RAD51DO75771 328 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 TBX18O95935 607 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 GMPRP36959 345 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 IDH3GP51553 393 aaPredicted RBP12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 ITPRIPL2Q3MIP1 535 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 LRP10Q7Z4F1 713 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 DCUN1D4Q92564 292 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 TFGQ92734 400 aaPredicted RBP12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 MALSU1Q96EH3 234 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 GIMAP5Q96F15 307 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 GFOD1Q9NXC2 390 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 A0A1W2PQ45 241 aaPredicted RBP12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 A0A1W2PQY0 241 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 B4GAT1O43505 415 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 AP1G1O43747 822 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 CD3GP09693 182 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 AK4P27144 223 aaPredicted RBP12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 AQP2P41181 271 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 PCGF3Q3KNV8 242 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 UGT3A2Q3SY77 523 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 METAP1DQ6UB28 335 aaPredicted RBP12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 PNPLA2Q96AD5 504 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 PARPBPQ9NWS1 579 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 KIDINS220Q9ULH0 1771 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 LOC105369274A0A096LPK9 316 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 WASHC1A8K0Z3 465 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 POP7O75817 140 aaKnown RBP12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 SLC34A2O95436 690 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 PKLRP30613 574 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 TAS2R31P59538 309 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 POU6F2P78424 691 aaPredicted RBP12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 TAP2Q03519 686 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 OR4N4Q8N0Y3 316 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 LRRC15Q8TF66 581 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 SGTBQ96EQ0 304 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 ZNF416Q9BWM5 594 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 IGFLR1Q9H665 355 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 RETREG1Q9H6L5 497 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 WDR26Q9H7D7 661 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 RDH14Q9HBH5 336 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 ENY2Q9NPA8 101 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 HOXC12P31275 282 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 PRSS3P35030 304 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 ARL3P36405 182 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 CD79BP40259 229 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 CDKN1CP49918 316 aaPredicted RBP12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 RAP2BP61225 183 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 VEZF1Q14119 521 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 OR4D1Q15615 310 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 NDUFAF5Q5TEU4 345 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 FAM83FQ8NEG4 500 aaPredicted RBP12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.14□□□□□ -0.474e-7■■■□□ 19.2
SYNCRIP-201ENST00000355238 PROKR1Q8TCW9 393 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 ELP4Q96EB1 424 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 ZNF701Q9NV72 531 aaPredicted RBP12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 PCTPQ9UKL6 214 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 C8orf89P0DMQ9 161 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 MMP12P39900 470 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 GPR143P51810 404 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 PTPRCAPQ14761 206 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 ZNF791Q3KP31 576 aaPredicted RBP12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 C3orf33Q6P1S2 294 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 VRK1Q99986 396 aaPredicted RBP12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 CLEC4EQ9ULY5 219 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 SOWAHBA6NEL2 793 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 NRP1O14786 923 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 FHP07954 510 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 C1GALT1C1LP0DN25 315 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 GPX3P22352 226 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 SLC10A2Q12908 348 aaPredicted RBP12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 NFATC2Q13469 925 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 TMEM173Q86WV6 379 aaPredicted RBP12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 ANKK1Q8NFD2 765 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 B3GNT7Q8NFL0 401 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 NMNAT1Q9HAN9 279 aaPredicted RBP12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 DUOX1Q9NRD9 1551 aa12.14□□□□□ -0.47
SYNCRIP-201ENST00000355238 OR6C65A6NJZ3 312 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 ARPC1BO15143 372 aaKnown RBP12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 EMC8O43402 210 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 ADRB3P13945 408 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 RPL10P27635 214 aaKnown RBP12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 SOX3P41225 446 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 PEA15Q15121 130 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 PAGE3Q5JUK9 113 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 LRIF1Q5T3J3 769 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 CEP68Q76N32 757 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 B3GNT8Q7Z7M8 397 aa12.13□□□□□ -0.47
SYNCRIP-201ENST00000355238 ISCA2Q86U28 154 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms