RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 TDRD6O60522 2096 aaKnown RBP16.16■□□□□ 0.18
VPS13B-201ENST00000355155 PCDH15Q96QU1 1955 aa16.16■□□□□ 0.18
VPS13B-201ENST00000355155 A0A1B0GTQ1 180 aa16.16■□□□□ 0.18
VPS13B-201ENST00000355155 TMEM247A6NEH6 219 aa16.16■□□□□ 0.18
VPS13B-201ENST00000355155 DUXAA6NLW8 204 aa16.16■□□□□ 0.18
VPS13B-201ENST00000355155 C5orf58C9J3I9 102 aa16.16■□□□□ 0.18
VPS13B-201ENST00000355155 SYT5O00445 386 aa16.16■□□□□ 0.18
VPS13B-201ENST00000355155 CASC3O15234 703 aaKnown RBP16.16■□□□□ 0.18
VPS13B-201ENST00000355155 TOX3O15405 576 aaPredicted RBP16.16■□□□□ 0.18
VPS13B-201ENST00000355155 HMGN2P05204 90 aaKnown RBP16.16■□□□□ 0.18
VPS13B-201ENST00000355155 OR12D1P0DN82 309 aa16.16■□□□□ 0.18
VPS13B-201ENST00000355155 GNSP15586 552 aa16.16■□□□□ 0.18
VPS13B-201ENST00000355155 FEN1P39748 380 aaKnown RBP16.16■□□□□ 0.18
VPS13B-201ENST00000355155 IST1P53990 364 aa16.16■□□□□ 0.18
VPS13B-201ENST00000355155 CRISP3P54108 245 aa16.16■□□□□ 0.18
VPS13B-201ENST00000355155 RAD23AP54725 363 aa16.16■□□□□ 0.18
VPS13B-201ENST00000355155 KEAP1Q14145 624 aa16.16■□□□□ 0.18
VPS13B-201ENST00000355155 MFSD12Q6NUT3 480 aa16.16■□□□□ 0.18
VPS13B-201ENST00000355155 TMEM107Q6UX40 140 aa16.16■□□□□ 0.18
VPS13B-201ENST00000355155 PRSS41Q7RTY9 318 aa16.16■□□□□ 0.18
VPS13B-201ENST00000355155 OR7D2Q96RA2 312 aa16.16■□□□□ 0.18
VPS13B-201ENST00000355155 GABARAPL3Q9BY60 117 aa16.16■□□□□ 0.18
VPS13B-201ENST00000355155 AMBRA1Q9C0C7 1298 aa16.16■□□□□ 0.18
VPS13B-201ENST00000355155 EXD2Q9NVH0 621 aa16.16■□□□□ 0.18
VPS13B-201ENST00000355155 A0A1W2PS29 197 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 DPPA5A6NC42 116 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 SERPINB7O75635 380 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 RYKP34925 604 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 TP53BP2Q13625 1128 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 FAM181AQ8N9Y4 354 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 OR7G2Q8NG99 324 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 NR4A3Q92570 626 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 TPD52L3Q96J77 140 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 PITX2Q99697 317 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 PIP5K1AQ99755 562 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 TREX2Q9BQ50 279 aaPredicted RBP16.15■□□□□ 0.18
VPS13B-201ENST00000355155 FUZQ9BT04 418 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 DUSP23Q9BVJ7 150 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 KLHL25Q9H0H3 589 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 TOR3AQ9H497 397 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 SATB2Q9UPW6 733 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 MAGED1Q9Y5V3 778 aaPredicted RBP16.15■□□□□ 0.18
VPS13B-201ENST00000355155 RHPN2P1A8MT19 583 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 hCG_2039718K7EN88 272 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 SLC35E2P0CK97 266 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 EPHA8P29322 1005 aaPredicted RBP16.15■□□□□ 0.18
VPS13B-201ENST00000355155 MC3RP41968 323 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 DAPP51397 102 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 RPS26P62854 115 aaKnown RBP16.15■□□□□ 0.18
VPS13B-201ENST00000355155 MAP4K2Q12851 820 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 PUM1Q14671 1186 aaKnown RBP eCLIP16.15■□□□□ 0.184e-6■□□□□ 8.5
VPS13B-201ENST00000355155 PRICKLE4Q2TBC4 344 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 YOD1Q5VVQ6 348 aaPredicted RBP16.15■□□□□ 0.18
VPS13B-201ENST00000355155 SLC35F3Q8IY50 421 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 ZNF595Q8IYB9 648 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 OR10Q1Q8NGQ4 319 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 MVB12AQ96EY5 273 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 SLC41A2Q96JW4 573 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 STACQ99469 402 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 RUBCNLQ9H714 662 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 SMURF2Q9HAU4 748 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 PDE7BQ9NP56 450 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 LRIT1Q9P2V4 623 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 FBXO4Q9UKT5 387 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 MYRFQ9Y2G1 1151 aa16.15■□□□□ 0.18
VPS13B-201ENST00000355155 PLK5Q496M5 336 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 DHRS4L2Q6PKH6 230 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 CYP4Z1Q86W10 505 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 D2HGDHQ8N465 521 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 TMEM52Q8NDY8 209 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 PINK1Q9BXM7 581 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 SAP130Q9H0E3 1048 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 EVA1AQ9H8M9 152 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 EYSQ5T1H1 3165 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 COL5A1P20908 1838 aaPredicted RBP16.14■□□□□ 0.17
VPS13B-201ENST00000355155 BMP10O95393 424 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 FESP07332 822 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 CHRM4P08173 479 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 AQP1P29972 269 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 OTUD3Q5T2D3 398 aaPredicted RBP16.14■□□□□ 0.17
VPS13B-201ENST00000355155 KRT73Q86Y46 540 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 PIK3C3Q8NEB9 887 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 SAMHD1Q9Y3Z3 626 aaKnown RBP16.14■□□□□ 0.17
VPS13B-201ENST00000355155 IGHV5-51A0A0C4DH38 117 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 FGF17O60258 216 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 MED26O95402 600 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 GNAO1P09471 354 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 CNR2P34972 360 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 CASP9P55211 416 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 CFHR1Q03591 330 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 SYPL1Q16563 259 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 DUSP7Q16829 419 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 ARHGAP11BQ3KRB8 267 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 ZNF691Q5VV52 312 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 PLXDC1Q8IUK5 500 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 GRIP2Q9C0E4 1043 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 POLE3Q9NRF9 147 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 ACER3Q9NUN7 267 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 RAB23Q9ULC3 237 aa16.14■□□□□ 0.17
VPS13B-201ENST00000355155 HRO43593 1189 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms