RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 WNT7BP56706 349 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 MPP2Q14168 576 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 LARP4Q71RC2 724 aaKnown RBP eCLIP12.6□□□□□ -0.39
SCN8A-202ENST00000355133 TOR1AIP2Q8NFQ8 470 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 RFT1Q96AA3 541 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 LRRC46Q96FV0 321 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 ZC3H10Q96K80 434 aaKnown RBP12.6□□□□□ -0.39
SCN8A-202ENST00000355133 HS6ST2Q96MM7 605 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 ZNF285Q96NJ3 590 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 NANSQ9NR45 359 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 HCFC1R1Q9NWW0 138 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 SLITRK5O94991 958 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 TIMP1P01033 207 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 CD3GP09693 182 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 RHCEP18577 417 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 ZNF551Q7Z340 670 aaPredicted RBP12.6□□□□□ -0.39
SCN8A-202ENST00000355133 VTCN1Q7Z7D3 282 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 SPAG16Q8N0X2 631 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 GPR137CQ8N3F9 429 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 OR52E2Q8NGJ4 325 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 TRBV2A0A0J9YWF9 115 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 ZNF217O75362 1048 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 ACTC1P68032 377 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 ACTA1P68133 377 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 HSD11B2P80365 405 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 GRM7Q14831 915 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 TMEM69Q5SWH9 247 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 ZER1Q7Z7L7 766 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 FOXJ1Q92949 421 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 FAM46AQ96IP4 442 aaKnown RBP12.59□□□□□ -0.39
SCN8A-202ENST00000355133 HERPUD2Q9BSE4 406 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 E7ESA3 106 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 M0R129 80 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 ATE1O95260 518 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 SYPP08247 313 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 ARSAP15289 507 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 ARL3P36405 182 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 FASLGP48023 281 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 C22orf42Q6IC83 251 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 XKRXQ6PP77 449 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 BLOC1S3Q6QNY0 202 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 UNC5DQ6UXZ4 953 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 ZFP41Q8N8Y5 198 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 ZNF709Q8N972 641 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 MAL2Q969L2 176 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 CCM2LQ9NUG4 571 aaPredicted RBP12.59□□□□□ -0.39
SCN8A-202ENST00000355133 PTBP2Q9UKA9 531 aaKnown RBP12.59□□□□□ -0.39
SCN8A-202ENST00000355133 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 S100A2P29034 98 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 FRKP42685 505 aaPredicted RBP12.59□□□□□ -0.39
SCN8A-202ENST00000355133 RGS19P49795 217 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 SLC26A5P58743 744 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 OR5AR1Q8NGP9 310 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 RPLP0P6Q8NHW5 317 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 PPP1R14BQ96C90 147 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 ZNF559Q9BR84 538 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 TMEM184CQ9NVA4 438 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 ST14Q9Y5Y6 855 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 SPEF2Q9C093 1822 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 IGKV6-21A0A0C4DH24 114 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 ZNF182P17025 639 aaPredicted RBP12.59□□□□□ -0.39
SCN8A-202ENST00000355133 NDUFV2P19404 249 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 LCN1P31025 176 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 PXNP49023 591 aaPredicted RBP12.59□□□□□ -0.39
SCN8A-202ENST00000355133 RIDAP52758 137 aaKnown RBP12.59□□□□□ -0.39
SCN8A-202ENST00000355133 IST1P53990 364 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 CLDN8P56748 225 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 SH3BP2P78314 561 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 MALLQ13021 153 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 C15orf39Q6ZRI6 1047 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 HS3ST5Q8IZT8 346 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 PNPLA1Q8N8W4 532 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 LSM14AQ8ND56 463 aaKnown RBP12.59□□□□□ -0.39
SCN8A-202ENST00000355133 TMEM19Q96HH6 336 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 GXYLT2A0PJZ3 443 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 SLC16A8O95907 504 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 MAS1P04201 325 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 DCKP27707 260 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 MOGQ16653 247 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 CDNFQ49AH0 187 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 ATAD3CQ5T2N8 411 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 OR4K13Q8NH42 304 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 ASB15Q8WXK1 588 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 SCRN2Q96FV2 425 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 LRR1Q96L50 414 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 GPRC5BQ9NZH0 403 aa12.59□□□□□ -0.39
SCN8A-202ENST00000355133 KLHL33A6NCF5 533 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 H0YAE9 185 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 H3BQ06 376 aaPredicted RBP12.58□□□□□ -0.4
SCN8A-202ENST00000355133 STSP08842 583 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 LAMP1P11279 417 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 CFL1P23528 166 aaKnown RBP12.58□□□□□ -0.4
SCN8A-202ENST00000355133 SUOXP51687 545 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 NDUFAF5Q5TEU4 345 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 LEG1Q6P5S2 330 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 OR14L1PQ8NHC6 308 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 FUBP1Q96AE4 644 aaKnown RBP12.58□□□□□ -0.4
SCN8A-202ENST00000355133 APIPQ96GX9 242 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 POLE4Q9NR33 117 aa12.58□□□□□ -0.4
SCN8A-202ENST00000355133 ANKMY1Q9P2S6 941 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms